Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PCP4P48539 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
PCP4P48539 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PCP4P48539 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PCP4P48539 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PCP4P48539 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.6□□□□□ -0.55
PCP4P48539 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
PCP4P48539 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
PCP4P48539 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
PCP4P48539 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.6□□□□□ -0.55
PCP4P48539 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC11.6□□□□□ -0.55
PCP4P48539 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PCP4P48539 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PCP4P48539 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC11.6□□□□□ -0.55
PCP4P48539 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC11.6□□□□□ -0.55
PCP4P48539 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PCP4P48539 PIGN-226ENST00000638591 2776 ntTSL 5 BASIC11.6□□□□□ -0.55
PCP4P48539 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
PCP4P48539 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
PCP4P48539 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PCP4P48539 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
PCP4P48539 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PCP4P48539 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
PCP4P48539 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
PCP4P48539 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PCP4P48539 DNAL1-201ENST00000311089 2312 ntTSL 2 BASIC11.59□□□□□ -0.55
PCP4P48539 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PCP4P48539 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
PCP4P48539 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.59□□□□□ -0.55
PCP4P48539 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
PCP4P48539 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PCP4P48539 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
PCP4P48539 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
PCP4P48539 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PCP4P48539 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PCP4P48539 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PCP4P48539 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
PCP4P48539 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
PCP4P48539 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
PCP4P48539 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
PCP4P48539 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PCP4P48539 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PCP4P48539 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC11.59□□□□□ -0.55
PCP4P48539 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC11.59□□□□□ -0.55
PCP4P48539 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.59□□□□□ -0.55
PCP4P48539 FLJ13224-201ENST00000313737 1514 ntBASIC11.59□□□□□ -0.55
PCP4P48539 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.59□□□□□ -0.55
PCP4P48539 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.59□□□□□ -0.55
PCP4P48539 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PCP4P48539 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
PCP4P48539 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
PCP4P48539 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PCP4P48539 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.59□□□□□ -0.55
PCP4P48539 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.59□□□□□ -0.55
PCP4P48539 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
PCP4P48539 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
PCP4P48539 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
PCP4P48539 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
PCP4P48539 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.59□□□□□ -0.55
PCP4P48539 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.59□□□□□ -0.55
PCP4P48539 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
PCP4P48539 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
PCP4P48539 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC11.58□□□□□ -0.55
PCP4P48539 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.55
PCP4P48539 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.58□□□□□ -0.55
PCP4P48539 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
PCP4P48539 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
PCP4P48539 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
PCP4P48539 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC11.58□□□□□ -0.56
PCP4P48539 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC11.58□□□□□ -0.56
PCP4P48539 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
PCP4P48539 ECEL1P2-201ENST00000461596 1295 ntBASIC11.58□□□□□ -0.56
PCP4P48539 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.58□□□□□ -0.56
PCP4P48539 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
PCP4P48539 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC11.58□□□□□ -0.56
PCP4P48539 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 TREH-201ENST00000264029 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC11.58□□□□□ -0.56
PCP4P48539 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
PCP4P48539 TEX21P-204ENST00000641479 1693 ntBASIC11.58□□□□□ -0.56
PCP4P48539 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms