Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LMO1P25800 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
LMO1P25800 AC005915.1-201ENST00000624912 2018 ntBASIC14.36□□□□□ -0.11
LMO1P25800 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LMO1P25800 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.36□□□□□ -0.11
LMO1P25800 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.36□□□□□ -0.11
LMO1P25800 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.36□□□□□ -0.11
LMO1P25800 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.36□□□□□ -0.11
LMO1P25800 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.36□□□□□ -0.11
LMO1P25800 TPM4P1-201ENST00000436100 807 ntBASIC14.36□□□□□ -0.11
LMO1P25800 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.36□□□□□ -0.11
LMO1P25800 HCG4P8-203ENST00000443049 980 ntBASIC14.36□□□□□ -0.11
LMO1P25800 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 KRT18P31-201ENST00000506277 1292 ntBASIC14.36□□□□□ -0.11
LMO1P25800 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.36□□□□□ -0.11
LMO1P25800 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.36□□□□□ -0.11
LMO1P25800 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.36□□□□□ -0.11
LMO1P25800 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.36□□□□□ -0.11
LMO1P25800 AL139288.1-201ENST00000623748 933 ntBASIC14.36□□□□□ -0.11
LMO1P25800 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 AL022326.1-202ENST00000641533 845 ntBASIC14.36□□□□□ -0.11
LMO1P25800 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LMO1P25800 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LMO1P25800 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.36□□□□□ -0.11
LMO1P25800 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
LMO1P25800 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LMO1P25800 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.36□□□□□ -0.11
LMO1P25800 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.35□□□□□ -0.11
LMO1P25800 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.35□□□□□ -0.11
LMO1P25800 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.35□□□□□ -0.11
LMO1P25800 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LMO1P25800 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 AP002414.1-201ENST00000391405 1147 ntBASIC14.35□□□□□ -0.11
LMO1P25800 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.35□□□□□ -0.11
LMO1P25800 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.35□□□□□ -0.11
LMO1P25800 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.35□□□□□ -0.11
LMO1P25800 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.35□□□□□ -0.11
LMO1P25800 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.35□□□□□ -0.11
LMO1P25800 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.35□□□□□ -0.11
LMO1P25800 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.35□□□□□ -0.11
LMO1P25800 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.35□□□□□ -0.11
LMO1P25800 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.35□□□□□ -0.11
LMO1P25800 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.35□□□□□ -0.11
LMO1P25800 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LMO1P25800 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.35□□□□□ -0.11
LMO1P25800 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LMO1P25800 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LMO1P25800 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.35□□□□□ -0.11
LMO1P25800 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.35□□□□□ -0.11
LMO1P25800 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LMO1P25800 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO1P25800 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LMO1P25800 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.34□□□□□ -0.11
LMO1P25800 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LMO1P25800 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LMO1P25800 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
LMO1P25800 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LMO1P25800 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LMO1P25800 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO1P25800 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO1P25800 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LMO1P25800 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
LMO1P25800 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.34□□□□□ -0.11
LMO1P25800 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LMO1P25800 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LMO1P25800 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LMO1P25800 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LMO1P25800 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LMO1P25800 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
LMO1P25800 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms