Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.91■□□□□ 0.94
ITGA6P23229 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.91■□□□□ 0.94
ITGA6P23229 AC087641.1-201ENST00000557561 1021 ntBASIC20.91■□□□□ 0.94
ITGA6P23229 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ITGA6P23229 U1.21-201ENST00000580816 167 ntBASIC20.91■□□□□ 0.94
ITGA6P23229 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ITGA6P23229 KRT8P49-201ENST00000604166 1432 ntBASIC20.91■□□□□ 0.94
ITGA6P23229 LINC02012-201ENST00000608206 1725 ntBASIC20.91■□□□□ 0.94
ITGA6P23229 LINC00896-202ENST00000609602 2128 ntBASIC20.91■□□□□ 0.94
ITGA6P23229 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ITGA6P23229 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ITGA6P23229 AC009093.7-201ENST00000623853 1223 ntBASIC20.91■□□□□ 0.94
ITGA6P23229 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ITGA6P23229 LINC00628-201ENST00000628516 1289 ntBASIC20.91■□□□□ 0.94
ITGA6P23229 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ITGA6P23229 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ITGA6P23229 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ITGA6P23229 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.91■□□□□ 0.94
ITGA6P23229 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ITGA6P23229 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ITGA6P23229 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ITGA6P23229 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.9■□□□□ 0.94
ITGA6P23229 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ITGA6P23229 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.9■□□□□ 0.94
ITGA6P23229 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ITGA6P23229 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.9■□□□□ 0.94
ITGA6P23229 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.9■□□□□ 0.94
ITGA6P23229 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
ITGA6P23229 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ITGA6P23229 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.9■□□□□ 0.94
ITGA6P23229 AC005237.2-201ENST00000434368 219 ntBASIC20.9■□□□□ 0.94
ITGA6P23229 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.9■□□□□ 0.94
ITGA6P23229 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ITGA6P23229 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.9■□□□□ 0.94
ITGA6P23229 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ITGA6P23229 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ITGA6P23229 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.9■□□□□ 0.94
ITGA6P23229 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ITGA6P23229 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ITGA6P23229 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ITGA6P23229 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ITGA6P23229 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ITGA6P23229 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ITGA6P23229 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.9■□□□□ 0.94
ITGA6P23229 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ITGA6P23229 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ITGA6P23229 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.89■□□□□ 0.94
ITGA6P23229 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ITGA6P23229 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ITGA6P23229 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.89■□□□□ 0.94
ITGA6P23229 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ITGA6P23229 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ITGA6P23229 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.89■□□□□ 0.93
ITGA6P23229 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.89■□□□□ 0.93
ITGA6P23229 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 AC069335.1-201ENST00000489972 472 ntBASIC20.89■□□□□ 0.93
ITGA6P23229 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.89■□□□□ 0.93
ITGA6P23229 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.89■□□□□ 0.93
ITGA6P23229 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ITGA6P23229 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
ITGA6P23229 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
ITGA6P23229 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.89■□□□□ 0.93
ITGA6P23229 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.89■□□□□ 0.93
ITGA6P23229 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.89■□□□□ 0.93
ITGA6P23229 AL031055.1-201ENST00000606362 631 ntBASIC20.89■□□□□ 0.93
ITGA6P23229 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.89■□□□□ 0.93
ITGA6P23229 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.89■□□□□ 0.93
ITGA6P23229 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
ITGA6P23229 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
ITGA6P23229 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.89■□□□□ 0.93
ITGA6P23229 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ITGA6P23229 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.89■□□□□ 0.93
ITGA6P23229 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITGA6P23229 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ITGA6P23229 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.89■□□□□ 0.93
ITGA6P23229 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
ITGA6P23229 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ITGA6P23229 AC092053.1-201ENST00000605787 1936 ntBASIC20.88■□□□□ 0.93
ITGA6P23229 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ITGA6P23229 AL021920.2-201ENST00000624828 1351 ntBASIC20.88■□□□□ 0.93
ITGA6P23229 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.88■□□□□ 0.93
ITGA6P23229 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ITGA6P23229 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ITGA6P23229 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms