Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCFC2P16383 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
GCFC2P16383 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCFC2P16383 AC092068.3-201ENST00000587894 2016 ntBASIC19.27■□□□□ 0.68
GCFC2P16383 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCFC2P16383 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCFC2P16383 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCFC2P16383 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
GCFC2P16383 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCFC2P16383 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.27■□□□□ 0.68
GCFC2P16383 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.27■□□□□ 0.68
GCFC2P16383 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCFC2P16383 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.27■□□□□ 0.68
GCFC2P16383 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.27■□□□□ 0.68
GCFC2P16383 CRYGEP-201ENST00000412192 528 ntBASIC19.27■□□□□ 0.68
GCFC2P16383 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.27■□□□□ 0.68
GCFC2P16383 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.27■□□□□ 0.68
GCFC2P16383 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCFC2P16383 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
GCFC2P16383 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.27■□□□□ 0.68
GCFC2P16383 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCFC2P16383 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCFC2P16383 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCFC2P16383 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCFC2P16383 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.27■□□□□ 0.68
GCFC2P16383 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCFC2P16383 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
GCFC2P16383 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GCFC2P16383 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
GCFC2P16383 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GCFC2P16383 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GCFC2P16383 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
GCFC2P16383 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GCFC2P16383 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.27■□□□□ 0.67
GCFC2P16383 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.27■□□□□ 0.67
GCFC2P16383 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCFC2P16383 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCFC2P16383 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCFC2P16383 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCFC2P16383 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.26■□□□□ 0.67
GCFC2P16383 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCFC2P16383 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GCFC2P16383 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCFC2P16383 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCFC2P16383 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.26■□□□□ 0.67
GCFC2P16383 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCFC2P16383 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCFC2P16383 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GCFC2P16383 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.26■□□□□ 0.67
GCFC2P16383 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.26■□□□□ 0.67
GCFC2P16383 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
GCFC2P16383 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.26■□□□□ 0.67
GCFC2P16383 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.26■□□□□ 0.67
GCFC2P16383 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.26■□□□□ 0.67
GCFC2P16383 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
GCFC2P16383 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCFC2P16383 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GCFC2P16383 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GCFC2P16383 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GCFC2P16383 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.26■□□□□ 0.67
GCFC2P16383 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.26■□□□□ 0.67
GCFC2P16383 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GCFC2P16383 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GCFC2P16383 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCFC2P16383 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCFC2P16383 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCFC2P16383 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.25■□□□□ 0.67
GCFC2P16383 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCFC2P16383 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GCFC2P16383 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCFC2P16383 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.25■□□□□ 0.67
GCFC2P16383 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
GCFC2P16383 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GCFC2P16383 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCFC2P16383 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GCFC2P16383 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GCFC2P16383 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.25■□□□□ 0.67
GCFC2P16383 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
GCFC2P16383 AL022342.1-201ENST00000400363 863 ntBASIC19.25■□□□□ 0.67
GCFC2P16383 HCG4B-203ENST00000450128 991 ntBASIC19.25■□□□□ 0.67
GCFC2P16383 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GCFC2P16383 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.25■□□□□ 0.67
GCFC2P16383 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCFC2P16383 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GCFC2P16383 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCFC2P16383 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCFC2P16383 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCFC2P16383 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCFC2P16383 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.25■□□□□ 0.67
GCFC2P16383 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GCFC2P16383 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GCFC2P16383 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCFC2P16383 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCFC2P16383 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
GCFC2P16383 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCFC2P16383 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.24■□□□□ 0.67
GCFC2P16383 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCFC2P16383 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GCFC2P16383 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.24■□□□□ 0.67
GCFC2P16383 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms