Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.16■□□□□ 0.66
HMGCRP04035 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCRP04035 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
HMGCRP04035 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
HMGCRP04035 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.16■□□□□ 0.66
HMGCRP04035 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.16■□□□□ 0.66
HMGCRP04035 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.16■□□□□ 0.66
HMGCRP04035 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.16■□□□□ 0.66
HMGCRP04035 AC027369.6-201ENST00000525520 931 ntBASIC19.16■□□□□ 0.66
HMGCRP04035 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCRP04035 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HMGCRP04035 AC004233.3-201ENST00000607794 1269 ntBASIC19.16■□□□□ 0.66
HMGCRP04035 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCRP04035 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCRP04035 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCRP04035 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCRP04035 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCRP04035 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCRP04035 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.16■□□□□ 0.66
HMGCRP04035 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGCRP04035 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCRP04035 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.16■□□□□ 0.66
HMGCRP04035 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCRP04035 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCRP04035 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HMGCRP04035 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCRP04035 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
HMGCRP04035 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HMGCRP04035 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HMGCRP04035 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCRP04035 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
HMGCRP04035 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCRP04035 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.15■□□□□ 0.66
HMGCRP04035 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.15■□□□□ 0.66
HMGCRP04035 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC19.15■□□□□ 0.66
HMGCRP04035 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.15■□□□□ 0.66
HMGCRP04035 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.15■□□□□ 0.66
HMGCRP04035 AL590560.3-201ENST00000623350 461 ntBASIC19.15■□□□□ 0.66
HMGCRP04035 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCRP04035 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.15■□□□□ 0.66
HMGCRP04035 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
HMGCRP04035 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCRP04035 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCRP04035 REXO1L11P-201ENST00000620964 1927 ntBASIC19.15■□□□□ 0.66
HMGCRP04035 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.15■□□□□ 0.66
HMGCRP04035 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCRP04035 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.15■□□□□ 0.66
HMGCRP04035 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCRP04035 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.14■□□□□ 0.66
HMGCRP04035 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HMGCRP04035 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.14■□□□□ 0.66
HMGCRP04035 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCRP04035 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
HMGCRP04035 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.14■□□□□ 0.65
HMGCRP04035 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
HMGCRP04035 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
HMGCRP04035 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCRP04035 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.14■□□□□ 0.65
HMGCRP04035 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCRP04035 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCRP04035 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCRP04035 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCRP04035 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCRP04035 TSSK5P-201ENST00000423978 907 ntBASIC19.14■□□□□ 0.65
HMGCRP04035 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.14■□□□□ 0.65
HMGCRP04035 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.14■□□□□ 0.65
HMGCRP04035 KRT17P7-201ENST00000451704 1104 ntBASIC19.14■□□□□ 0.65
HMGCRP04035 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.14■□□□□ 0.65
HMGCRP04035 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.14■□□□□ 0.65
HMGCRP04035 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.14■□□□□ 0.65
HMGCRP04035 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCRP04035 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.14■□□□□ 0.65
HMGCRP04035 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCRP04035 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HMGCRP04035 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCRP04035 AC022144.1-201ENST00000602255 1580 ntBASIC19.14■□□□□ 0.65
HMGCRP04035 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
HMGCRP04035 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCRP04035 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCRP04035 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCRP04035 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.14■□□□□ 0.65
HMGCRP04035 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCRP04035 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGCRP04035 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
HMGCRP04035 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
HMGCRP04035 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGCRP04035 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGCRP04035 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.13■□□□□ 0.65
HMGCRP04035 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.13■□□□□ 0.65
HMGCRP04035 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
HMGCRP04035 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGCRP04035 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.13■□□□□ 0.65
HMGCRP04035 ATP5G2P4-201ENST00000442175 420 ntBASIC19.13■□□□□ 0.65
HMGCRP04035 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.13■□□□□ 0.65
HMGCRP04035 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGCRP04035 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
HMGCRP04035 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.13■□□□□ 0.65
HMGCRP04035 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.13■□□□□ 0.65
HMGCRP04035 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGCRP04035 CU639417.3-201ENST00000624240 1404 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms