Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A1P02452 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.37■□□□□ 0.85
COL1A1P02452 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.37■□□□□ 0.85
COL1A1P02452 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
COL1A1P02452 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A1P02452 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.37■□□□□ 0.85
COL1A1P02452 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.37■□□□□ 0.85
COL1A1P02452 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A1P02452 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.37■□□□□ 0.85
COL1A1P02452 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A1P02452 AC005237.2-201ENST00000434368 219 ntBASIC20.37■□□□□ 0.85
COL1A1P02452 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.37■□□□□ 0.85
COL1A1P02452 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.37■□□□□ 0.85
COL1A1P02452 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.37■□□□□ 0.85
COL1A1P02452 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.37■□□□□ 0.85
COL1A1P02452 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
COL1A1P02452 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.37■□□□□ 0.85
COL1A1P02452 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A1P02452 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A1P02452 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
COL1A1P02452 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.36■□□□□ 0.85
COL1A1P02452 WASH6P-202ENST00000359512 1437 ntBASIC20.36■□□□□ 0.85
COL1A1P02452 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.36■□□□□ 0.85
COL1A1P02452 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
COL1A1P02452 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
COL1A1P02452 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
COL1A1P02452 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
COL1A1P02452 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
COL1A1P02452 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.36■□□□□ 0.85
COL1A1P02452 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A1P02452 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A1P02452 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.36■□□□□ 0.85
COL1A1P02452 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
COL1A1P02452 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A1P02452 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A1P02452 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
COL1A1P02452 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A1P02452 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A1P02452 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A1P02452 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.36■□□□□ 0.85
COL1A1P02452 KLF2P3-201ENST00000451977 1087 ntBASIC20.36■□□□□ 0.85
COL1A1P02452 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.36■□□□□ 0.85
COL1A1P02452 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.36■□□□□ 0.85
COL1A1P02452 DUX4L27-201ENST00000554796 1261 ntBASIC20.36■□□□□ 0.85
COL1A1P02452 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A1P02452 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A1P02452 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A1P02452 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.36■□□□□ 0.85
COL1A1P02452 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A1P02452 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.36■□□□□ 0.85
COL1A1P02452 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A1P02452 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A1P02452 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A1P02452 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.35■□□□□ 0.85
COL1A1P02452 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A1P02452 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A1P02452 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A1P02452 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.35■□□□□ 0.85
COL1A1P02452 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.35■□□□□ 0.85
COL1A1P02452 SPDYE14P-201ENST00000442619 822 ntBASIC20.35■□□□□ 0.85
COL1A1P02452 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
COL1A1P02452 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.35■□□□□ 0.85
COL1A1P02452 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.35■□□□□ 0.85
COL1A1P02452 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.35■□□□□ 0.85
COL1A1P02452 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
COL1A1P02452 AL161645.1-201ENST00000622716 1255 ntBASIC20.35■□□□□ 0.85
COL1A1P02452 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.35■□□□□ 0.85
COL1A1P02452 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A1P02452 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
COL1A1P02452 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A1P02452 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A1P02452 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
COL1A1P02452 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
COL1A1P02452 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
COL1A1P02452 AC092068.3-201ENST00000587894 2016 ntBASIC20.34■□□□□ 0.85
COL1A1P02452 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
COL1A1P02452 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COL1A1P02452 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.34■□□□□ 0.85
COL1A1P02452 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.34■□□□□ 0.85
COL1A1P02452 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.34■□□□□ 0.85
COL1A1P02452 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.34■□□□□ 0.85
COL1A1P02452 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
COL1A1P02452 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COL1A1P02452 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.34■□□□□ 0.85
COL1A1P02452 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
COL1A1P02452 BASP1P1-201ENST00000430708 665 ntBASIC20.34■□□□□ 0.85
COL1A1P02452 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A1P02452 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.34■□□□□ 0.85
COL1A1P02452 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms