Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PTP4A3O75365 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.41■□□□□ 0.06
PTP4A3O75365 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.41■□□□□ 0.06
PTP4A3O75365 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.4■□□□□ 0.06
PTP4A3O75365 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.4■□□□□ 0.06
PTP4A3O75365 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.4■□□□□ 0.06
PTP4A3O75365 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.4■□□□□ 0.06
PTP4A3O75365 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.4■□□□□ 0.06
PTP4A3O75365 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
PTP4A3O75365 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 LINC00982-205ENST00000420957 435 ntBASIC15.4■□□□□ 0.06
PTP4A3O75365 FAM210CP-201ENST00000445714 574 ntBASIC15.4■□□□□ 0.06
PTP4A3O75365 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.4■□□□□ 0.06
PTP4A3O75365 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.4■□□□□ 0.06
PTP4A3O75365 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.4■□□□□ 0.06
PTP4A3O75365 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.4■□□□□ 0.06
PTP4A3O75365 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.4■□□□□ 0.06
PTP4A3O75365 NPAP1P7-201ENST00000613027 823 ntBASIC15.4■□□□□ 0.06
PTP4A3O75365 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PTP4A3O75365 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.4■□□□□ 0.06
PTP4A3O75365 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.4■□□□□ 0.06
PTP4A3O75365 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.4■□□□□ 0.06
PTP4A3O75365 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.4■□□□□ 0.06
PTP4A3O75365 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.4■□□□□ 0.06
PTP4A3O75365 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PTP4A3O75365 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.4■□□□□ 0.06
PTP4A3O75365 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 AL391256.1-201ENST00000443260 1855 ntBASIC15.4■□□□□ 0.06
PTP4A3O75365 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTP4A3O75365 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PTP4A3O75365 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PTP4A3O75365 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
PTP4A3O75365 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.39■□□□□ 0.05
PTP4A3O75365 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.39■□□□□ 0.05
PTP4A3O75365 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PTP4A3O75365 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.39■□□□□ 0.05
PTP4A3O75365 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PTP4A3O75365 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.39■□□□□ 0.05
PTP4A3O75365 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.39■□□□□ 0.05
PTP4A3O75365 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.39■□□□□ 0.05
PTP4A3O75365 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
PTP4A3O75365 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.39■□□□□ 0.05
PTP4A3O75365 AC087388.1-201ENST00000571370 1112 ntBASIC15.39■□□□□ 0.05
PTP4A3O75365 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.39■□□□□ 0.05
PTP4A3O75365 AP000550.4-202ENST00000639755 178 ntBASIC15.39■□□□□ 0.05
PTP4A3O75365 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PTP4A3O75365 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PTP4A3O75365 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PTP4A3O75365 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.39■□□□□ 0.05
PTP4A3O75365 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.39■□□□□ 0.05
PTP4A3O75365 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTP4A3O75365 AC079776.2-201ENST00000641154 1609 ntBASIC15.39■□□□□ 0.05
PTP4A3O75365 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.39■□□□□ 0.05
PTP4A3O75365 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTP4A3O75365 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTP4A3O75365 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTP4A3O75365 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTP4A3O75365 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.38■□□□□ 0.05
PTP4A3O75365 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.38■□□□□ 0.05
PTP4A3O75365 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.38■□□□□ 0.05
PTP4A3O75365 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms