Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA12O60330 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA12O60330 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDHGA12O60330 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDHGA12O60330 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA12O60330 CXCL1P1-201ENST00000502804 216 ntBASIC16.95■□□□□ 0.3
PCDHGA12O60330 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.95■□□□□ 0.3
PCDHGA12O60330 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDHGA12O60330 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDHGA12O60330 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA12O60330 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHGA12O60330 AC092902.6-201ENST00000641783 218 ntBASIC16.95■□□□□ 0.3
PCDHGA12O60330 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA12O60330 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.95■□□□□ 0.3
PCDHGA12O60330 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA12O60330 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA12O60330 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHGA12O60330 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA12O60330 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
PCDHGA12O60330 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA12O60330 AC108860.2-201ENST00000562760 2183 ntBASIC16.95■□□□□ 0.3
PCDHGA12O60330 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCDHGA12O60330 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA12O60330 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PCDHGA12O60330 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHGA12O60330 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA12O60330 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA12O60330 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 AL139400.1-201ENST00000366220 510 ntBASIC16.94■□□□□ 0.3
PCDHGA12O60330 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 ACTG1P4-201ENST00000425123 1122 ntBASIC16.94■□□□□ 0.3
PCDHGA12O60330 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 SPCS2P1-201ENST00000561636 679 ntBASIC16.94■□□□□ 0.3
PCDHGA12O60330 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.94■□□□□ 0.3
PCDHGA12O60330 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA12O60330 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA12O60330 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHGA12O60330 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA12O60330 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA12O60330 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA12O60330 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA12O60330 PI4KAP1-204ENST00000612579 1703 ntBASIC16.93■□□□□ 0.3
PCDHGA12O60330 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA12O60330 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA12O60330 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA12O60330 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA12O60330 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGA12O60330 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA12O60330 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHGA12O60330 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHGA12O60330 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDHGA12O60330 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGA12O60330 AC068137.2-201ENST00000605408 478 ntBASIC16.93■□□□□ 0.3
PCDHGA12O60330 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGA12O60330 REXO1L3P-201ENST00000622202 1288 ntBASIC16.93■□□□□ 0.3
PCDHGA12O60330 AC105339.1-204ENST00000636249 355 ntBASIC16.93■□□□□ 0.3
PCDHGA12O60330 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA12O60330 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA12O60330 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA12O60330 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGA12O60330 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA12O60330 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGA12O60330 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGA12O60330 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 AL121761.2-201ENST00000598007 1648 ntBASIC16.92■□□□□ 0.3
PCDHGA12O60330 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGA12O60330 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGA12O60330 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.92■□□□□ 0.3
PCDHGA12O60330 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms