Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
ACTN4O43707 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACTN4O43707 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACTN4O43707 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACTN4O43707 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ACTN4O43707 HLA-A-202ENST00000376806 1854 ntBASIC19.16■□□□□ 0.66
ACTN4O43707 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ACTN4O43707 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACTN4O43707 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ACTN4O43707 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACTN4O43707 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.16■□□□□ 0.66
ACTN4O43707 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
ACTN4O43707 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.16■□□□□ 0.66
ACTN4O43707 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ACTN4O43707 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.16■□□□□ 0.66
ACTN4O43707 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ACTN4O43707 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACTN4O43707 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ACTN4O43707 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACTN4O43707 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ACTN4O43707 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.16■□□□□ 0.66
ACTN4O43707 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACTN4O43707 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ACTN4O43707 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ACTN4O43707 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACTN4O43707 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ACTN4O43707 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
ACTN4O43707 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.15■□□□□ 0.66
ACTN4O43707 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ACTN4O43707 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.15■□□□□ 0.66
ACTN4O43707 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ACTN4O43707 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ACTN4O43707 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
ACTN4O43707 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.15■□□□□ 0.66
ACTN4O43707 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.15■□□□□ 0.66
ACTN4O43707 AC064862.7-201ENST00000604520 867 ntBASIC19.15■□□□□ 0.66
ACTN4O43707 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.15■□□□□ 0.66
ACTN4O43707 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.15■□□□□ 0.66
ACTN4O43707 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ACTN4O43707 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ACTN4O43707 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ACTN4O43707 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.15■□□□□ 0.66
ACTN4O43707 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ACTN4O43707 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ACTN4O43707 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
ACTN4O43707 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ACTN4O43707 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ACTN4O43707 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ACTN4O43707 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ACTN4O43707 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ACTN4O43707 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ACTN4O43707 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ACTN4O43707 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ACTN4O43707 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ACTN4O43707 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ACTN4O43707 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.14■□□□□ 0.65
ACTN4O43707 UPK3BP1-201ENST00000428678 509 ntBASIC19.14■□□□□ 0.65
ACTN4O43707 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.14■□□□□ 0.65
ACTN4O43707 NKAPP1-205ENST00000585790 367 ntBASIC19.14■□□□□ 0.65
ACTN4O43707 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.14■□□□□ 0.65
ACTN4O43707 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.14■□□□□ 0.65
ACTN4O43707 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ACTN4O43707 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ACTN4O43707 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ACTN4O43707 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ACTN4O43707 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ACTN4O43707 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ACTN4O43707 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
ACTN4O43707 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACTN4O43707 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ACTN4O43707 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACTN4O43707 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACTN4O43707 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACTN4O43707 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
ACTN4O43707 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.13■□□□□ 0.65
ACTN4O43707 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACTN4O43707 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.13■□□□□ 0.65
ACTN4O43707 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.13■□□□□ 0.65
ACTN4O43707 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.13■□□□□ 0.65
ACTN4O43707 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ACTN4O43707 AC243591.1-201ENST00000452967 1364 ntBASIC19.13■□□□□ 0.65
ACTN4O43707 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.13■□□□□ 0.65
ACTN4O43707 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACTN4O43707 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms