Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM1O00151 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PDLIM1O00151 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
PDLIM1O00151 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
PDLIM1O00151 KRT8P47-201ENST00000604727 1398 ntBASIC16.34■□□□□ 0.21
PDLIM1O00151 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM1O00151 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PDLIM1O00151 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PDLIM1O00151 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM1O00151 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PDLIM1O00151 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.34■□□□□ 0.21
PDLIM1O00151 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM1O00151 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PDLIM1O00151 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM1O00151 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM1O00151 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PDLIM1O00151 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM1O00151 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDLIM1O00151 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDLIM1O00151 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.33■□□□□ 0.21
PDLIM1O00151 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDLIM1O00151 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDLIM1O00151 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDLIM1O00151 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.33■□□□□ 0.21
PDLIM1O00151 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PDLIM1O00151 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDLIM1O00151 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
PDLIM1O00151 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.33■□□□□ 0.2
PDLIM1O00151 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.33■□□□□ 0.2
PDLIM1O00151 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.33■□□□□ 0.2
PDLIM1O00151 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.33■□□□□ 0.2
PDLIM1O00151 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.33■□□□□ 0.2
PDLIM1O00151 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 LINC01238-205ENST00000567549 1107 ntBASIC16.33■□□□□ 0.2
PDLIM1O00151 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.33■□□□□ 0.2
PDLIM1O00151 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.33■□□□□ 0.2
PDLIM1O00151 AC010240.3-201ENST00000607688 395 ntBASIC16.33■□□□□ 0.2
PDLIM1O00151 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PDLIM1O00151 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
PDLIM1O00151 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.33■□□□□ 0.2
PDLIM1O00151 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.33■□□□□ 0.2
PDLIM1O00151 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
PDLIM1O00151 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDLIM1O00151 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PDLIM1O00151 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PDLIM1O00151 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
PDLIM1O00151 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PDLIM1O00151 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.32■□□□□ 0.2
PDLIM1O00151 KRT18P38-201ENST00000449496 1282 ntBASIC16.32■□□□□ 0.2
PDLIM1O00151 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.32■□□□□ 0.2
PDLIM1O00151 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.32■□□□□ 0.2
PDLIM1O00151 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.32■□□□□ 0.2
PDLIM1O00151 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PDLIM1O00151 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.32■□□□□ 0.2
PDLIM1O00151 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
PDLIM1O00151 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.32■□□□□ 0.2
PDLIM1O00151 LINC01311-201ENST00000565162 1445 ntBASIC16.32■□□□□ 0.2
PDLIM1O00151 TSPY26P-202ENST00000565928 3884 ntBASIC16.32■□□□□ 0.2
PDLIM1O00151 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.32■□□□□ 0.2
PDLIM1O00151 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDLIM1O00151 NTF6B-201ENST00000591913 560 ntBASIC16.32■□□□□ 0.2
PDLIM1O00151 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms