Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 FDX1P1-201ENST00000449115 551 ntBASIC16.23■□□□□ 0.19
LRIT2A6NDA9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 AL021920.2-201ENST00000624828 1351 ntBASIC16.23■□□□□ 0.19
LRIT2A6NDA9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRIT2A6NDA9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 TUBB8P12-201ENST00000308911 1335 ntBASIC16.22■□□□□ 0.19
LRIT2A6NDA9 TUBB7P-202ENST00000428444 1305 ntBASIC16.22■□□□□ 0.19
LRIT2A6NDA9 TUBB8P7-204ENST00000567960 1332 ntBASIC16.22■□□□□ 0.19
LRIT2A6NDA9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 AC087163.2-201ENST00000457299 853 ntBASIC16.22■□□□□ 0.19
LRIT2A6NDA9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 AC117500.6-201ENST00000624871 588 ntBASIC16.22■□□□□ 0.19
LRIT2A6NDA9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 PCDHB17P-201ENST00000539533 2393 ntBASIC16.22■□□□□ 0.19
LRIT2A6NDA9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRIT2A6NDA9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRIT2A6NDA9 AC106886.4-201ENST00000623557 2502 ntBASIC16.21■□□□□ 0.19
LRIT2A6NDA9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms