Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.06■□□□□ 0
TRDV1A0A1B0GX56 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
TRDV1A0A1B0GX56 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TRDV1A0A1B0GX56 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRDV1A0A1B0GX56 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
TRDV1A0A1B0GX56 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.05■□□□□ 0
TRDV1A0A1B0GX56 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ 0
TRDV1A0A1B0GX56 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TRDV1A0A1B0GX56 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.05■□□□□ 0
TRDV1A0A1B0GX56 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRDV1A0A1B0GX56 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 MIR1238-201ENST00000408483 83 ntBASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 UBE2SP1-201ENST00000450587 669 ntBASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 AC079602.3-201ENST00000623931 403 ntBASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRDV1A0A1B0GX56 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 ID1-201ENST00000376105 1233 ntBASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 ECEL1P2-202ENST00000465689 757 ntBASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 AC111152.3-201ENST00000569699 673 ntBASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.04■□□□□ -0
TRDV1A0A1B0GX56 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms