Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 BICD1-207ENST00000551848 1962 ntBASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 AC236430.1-201ENST00000402231 743 ntBASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 AC015922.1-201ENST00000421102 1152 ntBASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 AC002472.2-201ENST00000442739 958 ntBASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 LINC01225-203ENST00000563550 1244 ntBASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 AL353732.1-201ENST00000569618 1459 ntBASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 FO538757.1-201ENST00000623083 1397 ntBASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 WASH6P-202ENST00000359512 1437 ntBASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 HCG4-201ENST00000418983 998 ntBASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 TREML5P-201ENST00000421694 576 ntBASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 AC005034.1-201ENST00000426657 489 ntBASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 SPDYE14P-201ENST00000442619 822 ntBASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 AC084121.4-201ENST00000641598 221 ntBASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 AF228730.8-201ENST00000642140 221 ntBASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CCDC187A0A096LP49 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC187A0A096LP49 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC187A0A096LP49 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC187A0A096LP49 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC187A0A096LP49 AC135050.7-201ENST00000624508 2218 ntBASIC16.11■□□□□ 0.17
CCDC187A0A096LP49 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC187A0A096LP49 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC187A0A096LP49 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC187A0A096LP49 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC187A0A096LP49 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC187A0A096LP49 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC187A0A096LP49 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CCDC187A0A096LP49 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCDC187A0A096LP49 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms