Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 AC078925.2-201ENST00000624013 1973 ntBASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 AC093525.9-201ENST00000624961 1746 ntBASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RHBDD3Q9Y3P4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 TP73-AS1-210ENST00000637775 1455 ntBASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 KRT8P10-201ENST00000450021 1447 ntBASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 MIR3180-1-201ENST00000580374 94 ntBASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 MIR3180-3-201ENST00000584616 94 ntBASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 AC069148.1-201ENST00000608741 768 ntBASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 AC091076.1-201ENST00000610741 619 ntBASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.02■□□□□ -0
RHBDD3Q9Y3P4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 RNF216P1-203ENST00000404404 2427 ntBASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.02□□□□□ -0.01
RHBDD3Q9Y3P4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 AC111152.3-201ENST00000569699 673 ntBASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 AC011467.2-201ENST00000598425 242 ntBASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 NSUN5P1-202ENST00000421140 1535 ntBASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 NSUN5P2-203ENST00000457352 1529 ntBASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.01□□□□□ -0.01
RHBDD3Q9Y3P4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms