Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC008267.7-201ENST00000624570 1194 ntBASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SYNPO2Q9UMS6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 AL023806.1-201ENST00000603994 1649 ntBASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 AC006277.1-201ENST00000624348 1610 ntBASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 AC005237.2-201ENST00000434368 219 ntBASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 AP002490.2-201ENST00000524791 560 ntBASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 AL139011.1-202ENST00000642063 584 ntBASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SYNPO2Q9UMS6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SYNPO2Q9UMS6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.52■□□□□ 0.71
SYNPO2Q9UMS6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 AP001059.3-201ENST00000619053 235 ntBASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 LINC00628-201ENST00000628516 1289 ntBASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SYNPO2Q9UMS6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 MIR346-201ENST00000362234 95 ntBASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SYNPO2Q9UMS6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms