Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.17□□□□□ -0.14
CALYQ9NYX4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.17□□□□□ -0.14
CALYQ9NYX4 KRT18P56-201ENST00000507275 550 ntBASIC14.17□□□□□ -0.14
CALYQ9NYX4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.17□□□□□ -0.14
CALYQ9NYX4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.17□□□□□ -0.14
CALYQ9NYX4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CALYQ9NYX4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.17□□□□□ -0.14
CALYQ9NYX4 REXO1L6P-202ENST00000619970 1078 ntBASIC14.17□□□□□ -0.14
CALYQ9NYX4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CALYQ9NYX4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CALYQ9NYX4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CALYQ9NYX4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CALYQ9NYX4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.17□□□□□ -0.14
CALYQ9NYX4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CALYQ9NYX4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CALYQ9NYX4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CALYQ9NYX4 AC106886.4-201ENST00000623557 2502 ntBASIC14.17□□□□□ -0.14
CALYQ9NYX4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
CALYQ9NYX4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CALYQ9NYX4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CALYQ9NYX4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CALYQ9NYX4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CALYQ9NYX4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CALYQ9NYX4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CALYQ9NYX4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 AC011676.5-201ENST00000624864 2660 ntBASIC14.16□□□□□ -0.14
CALYQ9NYX4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.16□□□□□ -0.14
CALYQ9NYX4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.16□□□□□ -0.14
CALYQ9NYX4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CALYQ9NYX4 SAPCD2P3-201ENST00000455031 850 ntBASIC14.16□□□□□ -0.14
CALYQ9NYX4 FGFR3P6-201ENST00000457012 610 ntBASIC14.16□□□□□ -0.14
CALYQ9NYX4 SCARNA2-201ENST00000458748 420 ntBASIC14.16□□□□□ -0.14
CALYQ9NYX4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CALYQ9NYX4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.16□□□□□ -0.14
CALYQ9NYX4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.16□□□□□ -0.14
CALYQ9NYX4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.16□□□□□ -0.14
CALYQ9NYX4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.16□□□□□ -0.14
CALYQ9NYX4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.16□□□□□ -0.14
CALYQ9NYX4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CALYQ9NYX4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.16□□□□□ -0.14
CALYQ9NYX4 AL353135.1-201ENST00000606729 504 ntBASIC14.16□□□□□ -0.14
CALYQ9NYX4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.16□□□□□ -0.14
CALYQ9NYX4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CALYQ9NYX4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CALYQ9NYX4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 SART3-203ENST00000546611 1184 ntBASIC14.15□□□□□ -0.14
CALYQ9NYX4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CALYQ9NYX4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CALYQ9NYX4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms