Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PPT1-213ENST00000641319 2388 ntBASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 RP9P-202ENST00000450133 1212 ntBASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 AP004607.4-201ENST00000530158 1459 ntBASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 AP005117.1-202ENST00000581724 1908 ntBASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 OS9-206ENST00000435406 2346 ntTSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 AC010141.3-201ENST00000456659 717 ntBASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 DUX4L28-201ENST00000623687 678 ntBASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CDC42SE1Q9NRR8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms