Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 KRT18P65-201ENST00000439811 1286 ntBASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 FAM87A-204ENST00000613235 858 ntBASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
C12orf4Q9NQ89 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 AL157888.1-201ENST00000631930 593 ntBASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 AP006294.2-201ENST00000641667 209 ntBASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.96□□□□□ -0.01
C12orf4Q9NQ89 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
C12orf4Q9NQ89 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
C12orf4Q9NQ89 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
C12orf4Q9NQ89 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
C12orf4Q9NQ89 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
C12orf4Q9NQ89 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
C12orf4Q9NQ89 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
C12orf4Q9NQ89 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
C12orf4Q9NQ89 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
C12orf4Q9NQ89 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
C12orf4Q9NQ89 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
C12orf4Q9NQ89 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
C12orf4Q9NQ89 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 AC034232.1-201ENST00000506026 1064 ntBASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 REXO1L11P-201ENST00000620964 1927 ntBASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
C12orf4Q9NQ89 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms