Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 MST1L-201ENST00000442552 2185 ntBASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 AL662844.4-201ENST00000606367 2838 ntBASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 AC092171.3-201ENST00000610122 2651 ntBASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC11.52□□□□□ -0.57
SND1-IT1Q9HBX3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 RNF216P1-203ENST00000404404 2427 ntBASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 BX276092.7-203ENST00000637198 1536 ntBASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 AL356309.3-201ENST00000624132 1934 ntBASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 AC078925.2-201ENST00000624013 1973 ntBASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 ANKRD26P3-201ENST00000454044 2748 ntBASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 AC009947.2-201ENST00000444014 672 ntBASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SND1-IT1Q9HBX3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 AL158047.1-201ENST00000445918 881 ntBASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 FITM1-202ENST00000559294 800 ntBASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC11.5□□□□□ -0.57
SND1-IT1Q9HBX3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms