Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 AC008741.2-201ENST00000612792 3115 ntBASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 NUS1P2-201ENST00000417358 873 ntBASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 KRT126P-201ENST00000549467 1181 ntBASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 AC111152.3-201ENST00000569699 673 ntBASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 AC138894.3-201ENST00000603787 634 ntBASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLK4Q9HAZ1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
CLK4Q9HAZ1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CLK4Q9HAZ1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLK4Q9HAZ1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 RBM17P3-201ENST00000417687 1192 ntBASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 DUSP5P1-201ENST00000441325 1139 ntBASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 LINC02199-201ENST00000506655 2702 ntBASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLK4Q9HAZ1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 AL450487.1-201ENST00000426799 995 ntBASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 ABCD1P5-201ENST00000445663 754 ntBASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLK4Q9HAZ1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms