Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 AP006294.2-201ENST00000641667 209 ntBASIC21.05■□□□□ 0.96
UPF2Q9HAU5 AL662844.4-201ENST00000606367 2838 ntBASIC21.05■□□□□ 0.96
UPF2Q9HAU5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 AC111152.3-201ENST00000569699 673 ntBASIC21.04■□□□□ 0.96
UPF2Q9HAU5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 AC019129.2-201ENST00000609837 1235 ntBASIC21.04■□□□□ 0.96
UPF2Q9HAU5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 AL138966.2-201ENST00000621997 464 ntBASIC21.04■□□□□ 0.96
UPF2Q9HAU5 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 TSPY26P-202ENST00000565928 3884 ntBASIC21.04■□□□□ 0.96
UPF2Q9HAU5 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UPF2Q9HAU5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC21.03■□□□□ 0.96
UPF2Q9HAU5 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.03■□□□□ 0.96
UPF2Q9HAU5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 AP002490.2-201ENST00000524791 560 ntBASIC21.03■□□□□ 0.96
UPF2Q9HAU5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UPF2Q9HAU5 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.02■□□□□ 0.96
UPF2Q9HAU5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms