Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 TSPY18P-201ENST00000441642 509 ntBASIC16.2■□□□□ 0.18
TUBA1CQ9BQE3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.2■□□□□ 0.18
TUBA1CQ9BQE3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.2■□□□□ 0.18
TUBA1CQ9BQE3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.2■□□□□ 0.18
TUBA1CQ9BQE3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TUBA1CQ9BQE3 AL121772.3-201ENST00000610840 674 ntBASIC16.2■□□□□ 0.18
TUBA1CQ9BQE3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.2■□□□□ 0.18
TUBA1CQ9BQE3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
TUBA1CQ9BQE3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TUBA1CQ9BQE3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA1CQ9BQE3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TUBA1CQ9BQE3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA1CQ9BQE3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.2■□□□□ 0.18
TUBA1CQ9BQE3 AC092850.2-201ENST00000623821 2697 ntBASIC16.2■□□□□ 0.18
TUBA1CQ9BQE3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA1CQ9BQE3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 NSUN5P1-202ENST00000421140 1535 ntBASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 NSUN5P2-203ENST00000457352 1529 ntBASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 AC005915.1-201ENST00000624912 2018 ntBASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 AC091304.2-201ENST00000564639 760 ntBASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBA1CQ9BQE3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 MINOS1P3-201ENST00000457048 203 ntBASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 AC068472.1-201ENST00000474589 881 ntBASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 KRT18P31-201ENST00000506277 1292 ntBASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 RN7SL510P-201ENST00000581311 263 ntBASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 IFNL4P1-201ENST00000607083 540 ntBASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 AL353801.3-201ENST00000609898 542 ntBASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 AC009154.2-201ENST00000621177 724 ntBASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBA1CQ9BQE3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms