Protein–RNA interactions for Protein: Q99439

CNN2, Calponin-2, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2Q99439 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.31■□□□□ 0.04
CNN2Q99439 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNN2Q99439 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNN2Q99439 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNN2Q99439 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNN2Q99439 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNN2Q99439 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNN2Q99439 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNN2Q99439 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNN2Q99439 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNN2Q99439 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNN2Q99439 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CNN2Q99439 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNN2Q99439 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.3■□□□□ 0.04
CNN2Q99439 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CNN2Q99439 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.3■□□□□ 0.04
CNN2Q99439 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNN2Q99439 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.3■□□□□ 0.04
CNN2Q99439 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.3■□□□□ 0.04
CNN2Q99439 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.3■□□□□ 0.04
CNN2Q99439 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.3■□□□□ 0.04
CNN2Q99439 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.3■□□□□ 0.04
CNN2Q99439 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.3■□□□□ 0.04
CNN2Q99439 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNN2Q99439 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNN2Q99439 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.3■□□□□ 0.04
CNN2Q99439 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNN2Q99439 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.3■□□□□ 0.04
CNN2Q99439 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNN2Q99439 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.3■□□□□ 0.04
CNN2Q99439 AC090616.6-201ENST00000582640 721 ntBASIC15.3■□□□□ 0.04
CNN2Q99439 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.3■□□□□ 0.04
CNN2Q99439 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CNN2Q99439 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CNN2Q99439 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.3■□□□□ 0.04
CNN2Q99439 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNN2Q99439 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.3■□□□□ 0.04
CNN2Q99439 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.3■□□□□ 0.04
CNN2Q99439 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNN2Q99439 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CNN2Q99439 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CNN2Q99439 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.29■□□□□ 0.04
CNN2Q99439 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNN2Q99439 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNN2Q99439 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.29■□□□□ 0.04
CNN2Q99439 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.29■□□□□ 0.04
CNN2Q99439 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.29■□□□□ 0.04
CNN2Q99439 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CNN2Q99439 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.29■□□□□ 0.04
CNN2Q99439 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNN2Q99439 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNN2Q99439 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNN2Q99439 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNN2Q99439 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
CNN2Q99439 KLF4P1-201ENST00000412782 1185 ntBASIC15.29■□□□□ 0.04
CNN2Q99439 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.29■□□□□ 0.04
CNN2Q99439 AL845331.1-201ENST00000424978 1190 ntBASIC15.29■□□□□ 0.04
CNN2Q99439 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.29■□□□□ 0.04
CNN2Q99439 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.29■□□□□ 0.04
CNN2Q99439 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.29■□□□□ 0.04
CNN2Q99439 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.29■□□□□ 0.04
CNN2Q99439 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.29■□□□□ 0.04
CNN2Q99439 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNN2Q99439 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.29■□□□□ 0.04
CNN2Q99439 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNN2Q99439 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNN2Q99439 IGHV3-41-201ENST00000613121 348 ntBASIC15.29■□□□□ 0.04
CNN2Q99439 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.29■□□□□ 0.04
CNN2Q99439 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.29■□□□□ 0.04
CNN2Q99439 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNN2Q99439 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CNN2Q99439 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.29■□□□□ 0.04
CNN2Q99439 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNN2Q99439 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNN2Q99439 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.29■□□□□ 0.04
CNN2Q99439 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.29■□□□□ 0.04
CNN2Q99439 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNN2Q99439 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CNN2Q99439 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CNN2Q99439 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNN2Q99439 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.28■□□□□ 0.04
CNN2Q99439 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNN2Q99439 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNN2Q99439 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNN2Q99439 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.28■□□□□ 0.04
CNN2Q99439 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNN2Q99439 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CNN2Q99439 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CNN2Q99439 TUBB8P12-201ENST00000308911 1335 ntBASIC15.28■□□□□ 0.04
CNN2Q99439 TUBB7P-202ENST00000428444 1305 ntBASIC15.28■□□□□ 0.04
CNN2Q99439 TUBB8P7-204ENST00000567960 1332 ntBASIC15.28■□□□□ 0.04
CNN2Q99439 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CNN2Q99439 AL671277.2-201ENST00000458060 996 ntBASIC15.28■□□□□ 0.04
CNN2Q99439 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNN2Q99439 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CNN2Q99439 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.28■□□□□ 0.04
CNN2Q99439 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CNN2Q99439 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CNN2Q99439 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CNN2Q99439 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms