Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 RNF152P1-201ENST00000397754 604 ntBASIC16.49■□□□□ 0.23
VPS33AQ96AX1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 SPDYE13P-201ENST00000445314 798 ntBASIC16.49■□□□□ 0.23
VPS33AQ96AX1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 AC006011.2-201ENST00000621313 1158 ntBASIC16.49■□□□□ 0.23
VPS33AQ96AX1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS33AQ96AX1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 AC125634.1-201ENST00000438758 1403 ntBASIC16.48■□□□□ 0.23
VPS33AQ96AX1 KRT8P10-201ENST00000450021 1447 ntBASIC16.48■□□□□ 0.23
VPS33AQ96AX1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 KRT18P57-201ENST00000443599 1254 ntBASIC16.48■□□□□ 0.23
VPS33AQ96AX1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 HOMER2P1-201ENST00000455653 964 ntBASIC16.48■□□□□ 0.23
VPS33AQ96AX1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VPS33AQ96AX1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 AC005521.1-201ENST00000393351 872 ntBASIC16.47■□□□□ 0.23
VPS33AQ96AX1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VPS33AQ96AX1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms