Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.74■□□□□ 0.11
HPS1Q92902 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HPS1Q92902 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HPS1Q92902 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HPS1Q92902 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.74■□□□□ 0.11
HPS1Q92902 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
HPS1Q92902 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.74■□□□□ 0.11
HPS1Q92902 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.74■□□□□ 0.11
HPS1Q92902 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.74■□□□□ 0.11
HPS1Q92902 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
HPS1Q92902 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HPS1Q92902 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HPS1Q92902 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.73■□□□□ 0.11
HPS1Q92902 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
HPS1Q92902 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.73■□□□□ 0.11
HPS1Q92902 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.73■□□□□ 0.11
HPS1Q92902 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HPS1Q92902 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
HPS1Q92902 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 AP000593.1-201ENST00000393668 712 ntBASIC15.73■□□□□ 0.11
HPS1Q92902 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
HPS1Q92902 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 KRT18P38-201ENST00000449496 1282 ntBASIC15.73■□□□□ 0.11
HPS1Q92902 AC009065.1-201ENST00000564055 1225 ntBASIC15.73■□□□□ 0.11
HPS1Q92902 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.73■□□□□ 0.11
HPS1Q92902 RN7SL275P-201ENST00000582762 335 ntBASIC15.73■□□□□ 0.11
HPS1Q92902 AC069148.1-201ENST00000608741 768 ntBASIC15.73■□□□□ 0.11
HPS1Q92902 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
HPS1Q92902 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.73■□□□□ 0.11
HPS1Q92902 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
HPS1Q92902 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HPS1Q92902 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
HPS1Q92902 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
HPS1Q92902 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.73■□□□□ 0.11
HPS1Q92902 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HPS1Q92902 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HPS1Q92902 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
HPS1Q92902 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.72■□□□□ 0.11
HPS1Q92902 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HPS1Q92902 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.72■□□□□ 0.11
HPS1Q92902 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HPS1Q92902 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.72■□□□□ 0.11
HPS1Q92902 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.72■□□□□ 0.11
HPS1Q92902 MTND2P7-201ENST00000521337 640 ntBASIC15.72■□□□□ 0.11
HPS1Q92902 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.72■□□□□ 0.11
HPS1Q92902 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.72■□□□□ 0.11
HPS1Q92902 AC104640.1-201ENST00000562617 2109 ntBASIC15.72■□□□□ 0.11
HPS1Q92902 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.72■□□□□ 0.11
HPS1Q92902 AC112497.1-201ENST00000624824 639 ntBASIC15.72■□□□□ 0.11
HPS1Q92902 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HPS1Q92902 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS1Q92902 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 AC068587.6-202ENST00000641839 5619 ntBASIC15.71■□□□□ 0.11
HPS1Q92902 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HPS1Q92902 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms