Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 ABCD1P5-201ENST00000445663 754 ntBASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 AC124947.2-201ENST00000547118 1133 ntBASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 AP000867.4-201ENST00000641616 219 ntBASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAF3IP1Q8TDR0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 AC106886.4-201ENST00000623557 2502 ntBASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 SPDYE21P-201ENST00000413323 827 ntBASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 AC005915.1-201ENST00000624912 2018 ntBASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAF3IP1Q8TDR0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 GPR89P-201ENST00000407924 1495 ntBASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 KRT16P4-201ENST00000453883 522 ntBASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 AC148477.5-201ENST00000625164 1645 ntBASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAF3IP1Q8TDR0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAF3IP1Q8TDR0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms