Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SNIP1Q8TAD8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 AKR1B10P2-201ENST00000577332 927 ntBASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 AC009118.2-201ENST00000613275 655 ntBASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SNIP1Q8TAD8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 RN7SL692P-201ENST00000464677 288 ntBASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 SERBP1P5-201ENST00000510079 1181 ntBASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 LINC01225-203ENST00000563550 1244 ntBASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SNIP1Q8TAD8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.08■□□□□ 0.17
SNIP1Q8TAD8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SNIP1Q8TAD8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SNIP1Q8TAD8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.08■□□□□ 0.17
SNIP1Q8TAD8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.08■□□□□ 0.17
SNIP1Q8TAD8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SNIP1Q8TAD8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SNIP1Q8TAD8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.08■□□□□ 0.17
SNIP1Q8TAD8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SNIP1Q8TAD8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 MTATP6P19-201ENST00000413797 659 ntBASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SNIP1Q8TAD8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms