Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AC105917.1-201ENST00000506637 2539 ntBASIC16.68■□□□□ 0.26
HIPK4Q8NE63 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 ECEL1P3-201ENST00000427961 737 ntBASIC16.68■□□□□ 0.26
HIPK4Q8NE63 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 DDX43P3-201ENST00000441064 443 ntBASIC16.68■□□□□ 0.26
HIPK4Q8NE63 TSPY15P-201ENST00000457163 923 ntBASIC16.68■□□□□ 0.26
HIPK4Q8NE63 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 AC023824.1-201ENST00000562945 2975 ntBASIC16.68■□□□□ 0.26
HIPK4Q8NE63 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.68■□□□□ 0.26
HIPK4Q8NE63 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIPK4Q8NE63 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 KRT18P65-201ENST00000439811 1286 ntBASIC16.66■□□□□ 0.26
HIPK4Q8NE63 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HIPK4Q8NE63 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms