Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 PAWRP1-201ENST00000451083 565 ntBASIC16.41■□□□□ 0.22
RNF44Q7L0R7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 PI4KAP1-204ENST00000612579 1703 ntBASIC16.4■□□□□ 0.22
RNF44Q7L0R7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.4■□□□□ 0.22
RNF44Q7L0R7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RNF44Q7L0R7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RNF44Q7L0R7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF44Q7L0R7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF44Q7L0R7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF44Q7L0R7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.38■□□□□ 0.21
RNF44Q7L0R7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RNF44Q7L0R7 AL023806.1-201ENST00000603994 1649 ntBASIC16.38■□□□□ 0.21
RNF44Q7L0R7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RNF44Q7L0R7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF44Q7L0R7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF44Q7L0R7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF44Q7L0R7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF44Q7L0R7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF44Q7L0R7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF44Q7L0R7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RNF44Q7L0R7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms