Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC62Q6P9F0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 AC008764.6-201ENST00000595909 2069 ntBASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 HLA-J-203ENST00000494367 1087 ntBASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 AC093520.2-201ENST00000561830 333 ntBASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC62Q6P9F0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 AL355306.1-201ENST00000415580 579 ntBASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC62Q6P9F0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 SLC25A1P3-201ENST00000395415 828 ntBASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 HMGA1P7-201ENST00000406908 502 ntBASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC62Q6P9F0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC62Q6P9F0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC62Q6P9F0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
CCDC62Q6P9F0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms