Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKL1Q00532 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL1Q00532 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL1Q00532 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.87■□□□□ 0.29
CDKL1Q00532 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKL1Q00532 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDKL1Q00532 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL1Q00532 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL1Q00532 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL1Q00532 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDKL1Q00532 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL1Q00532 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL1Q00532 LINC00554-201ENST00000564841 3011 ntBASIC16.87■□□□□ 0.29
CDKL1Q00532 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CDKL1Q00532 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
CDKL1Q00532 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKL1Q00532 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL1Q00532 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL1Q00532 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.86■□□□□ 0.29
CDKL1Q00532 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL1Q00532 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL1Q00532 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.86■□□□□ 0.29
CDKL1Q00532 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL1Q00532 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.86■□□□□ 0.29
CDKL1Q00532 AC079776.2-201ENST00000641154 1609 ntBASIC16.86■□□□□ 0.29
CDKL1Q00532 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.86■□□□□ 0.29
CDKL1Q00532 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL1Q00532 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL1Q00532 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL1Q00532 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CDKL1Q00532 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.86■□□□□ 0.29
CDKL1Q00532 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL1Q00532 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL1Q00532 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.86■□□□□ 0.29
CDKL1Q00532 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.86■□□□□ 0.29
CDKL1Q00532 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.86■□□□□ 0.29
CDKL1Q00532 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.86■□□□□ 0.29
CDKL1Q00532 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.86■□□□□ 0.29
CDKL1Q00532 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL1Q00532 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL1Q00532 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL1Q00532 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL1Q00532 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.86■□□□□ 0.29
CDKL1Q00532 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL1Q00532 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL1Q00532 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL1Q00532 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL1Q00532 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDKL1Q00532 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CDKL1Q00532 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.85■□□□□ 0.29
CDKL1Q00532 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.85■□□□□ 0.29
CDKL1Q00532 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKL1Q00532 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKL1Q00532 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CDKL1Q00532 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKL1Q00532 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDKL1Q00532 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDKL1Q00532 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 AC138894.3-201ENST00000603787 634 ntBASIC16.85■□□□□ 0.29
CDKL1Q00532 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.85■□□□□ 0.29
CDKL1Q00532 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CDKL1Q00532 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.85■□□□□ 0.29
CDKL1Q00532 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CDKL1Q00532 AP005117.1-201ENST00000584346 1413 ntBASIC16.85■□□□□ 0.29
CDKL1Q00532 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKL1Q00532 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKL1Q00532 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 AC148477.5-201ENST00000625164 1645 ntBASIC16.85■□□□□ 0.29
CDKL1Q00532 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKL1Q00532 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKL1Q00532 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL1Q00532 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKL1Q00532 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL1Q00532 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKL1Q00532 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL1Q00532 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL1Q00532 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CDKL1Q00532 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDKL1Q00532 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CDKL1Q00532 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDKL1Q00532 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKL1Q00532 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKL1Q00532 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms