Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 AC005336.2-201ENST00000593183 939 ntBASIC14.9□□□□□ -0.02
ATP1B3P54709 AL121672.3-201ENST00000608644 468 ntBASIC14.9□□□□□ -0.02
ATP1B3P54709 AL121956.5-201ENST00000625261 221 ntBASIC14.9□□□□□ -0.02
ATP1B3P54709 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATP1B3P54709 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.9□□□□□ -0.02
ATP1B3P54709 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.9□□□□□ -0.02
ATP1B3P54709 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATP1B3P54709 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.9□□□□□ -0.02
ATP1B3P54709 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.9□□□□□ -0.02
ATP1B3P54709 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATP1B3P54709 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATP1B3P54709 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATP1B3P54709 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATP1B3P54709 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ATP1B3P54709 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ATP1B3P54709 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.9□□□□□ -0.02
ATP1B3P54709 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATP1B3P54709 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ATP1B3P54709 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
ATP1B3P54709 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
ATP1B3P54709 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ATP1B3P54709 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.89□□□□□ -0.03
ATP1B3P54709 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
ATP1B3P54709 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.89□□□□□ -0.03
ATP1B3P54709 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.89□□□□□ -0.03
ATP1B3P54709 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
ATP1B3P54709 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.89□□□□□ -0.03
ATP1B3P54709 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.89□□□□□ -0.03
ATP1B3P54709 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ATP1B3P54709 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.89□□□□□ -0.03
ATP1B3P54709 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.89□□□□□ -0.03
ATP1B3P54709 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ATP1B3P54709 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.89□□□□□ -0.03
ATP1B3P54709 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.89□□□□□ -0.03
ATP1B3P54709 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
ATP1B3P54709 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ATP1B3P54709 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.89□□□□□ -0.03
ATP1B3P54709 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.89□□□□□ -0.03
ATP1B3P54709 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ATP1B3P54709 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.89□□□□□ -0.03
ATP1B3P54709 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.88□□□□□ -0.03
ATP1B3P54709 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
ATP1B3P54709 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.88□□□□□ -0.03
ATP1B3P54709 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.88□□□□□ -0.03
ATP1B3P54709 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATP1B3P54709 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATP1B3P54709 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.88□□□□□ -0.03
ATP1B3P54709 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.88□□□□□ -0.03
ATP1B3P54709 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.88□□□□□ -0.03
ATP1B3P54709 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATP1B3P54709 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
ATP1B3P54709 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATP1B3P54709 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATP1B3P54709 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATP1B3P54709 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.88□□□□□ -0.03
ATP1B3P54709 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.88□□□□□ -0.03
ATP1B3P54709 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATP1B3P54709 CHCHD2P8-201ENST00000429873 447 ntBASIC14.88□□□□□ -0.03
ATP1B3P54709 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.88□□□□□ -0.03
ATP1B3P54709 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.88□□□□□ -0.03
ATP1B3P54709 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
ATP1B3P54709 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.88□□□□□ -0.03
ATP1B3P54709 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ATP1B3P54709 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
ATP1B3P54709 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATP1B3P54709 AL049757.1-201ENST00000616842 1596 ntBASIC14.88□□□□□ -0.03
ATP1B3P54709 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATP1B3P54709 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ATP1B3P54709 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATP1B3P54709 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.88□□□□□ -0.03
ATP1B3P54709 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATP1B3P54709 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATP1B3P54709 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATP1B3P54709 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.88□□□□□ -0.03
ATP1B3P54709 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATP1B3P54709 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ATP1B3P54709 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 3220.4 ms