Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CPT1AP50416 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.83■□□□□ 0.6
CPT1AP50416 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CPT1AP50416 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CPT1AP50416 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPT1AP50416 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.83■□□□□ 0.6
CPT1AP50416 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.83■□□□□ 0.6
CPT1AP50416 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.83■□□□□ 0.6
CPT1AP50416 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.83■□□□□ 0.6
CPT1AP50416 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPT1AP50416 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
CPT1AP50416 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPT1AP50416 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CPT1AP50416 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPT1AP50416 FO538757.1-201ENST00000623083 1397 ntBASIC18.82■□□□□ 0.6
CPT1AP50416 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.82■□□□□ 0.6
CPT1AP50416 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CPT1AP50416 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPT1AP50416 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.82■□□□□ 0.6
CPT1AP50416 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPT1AP50416 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPT1AP50416 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.82■□□□□ 0.6
CPT1AP50416 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.82■□□□□ 0.6
CPT1AP50416 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.82■□□□□ 0.6
CPT1AP50416 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.82■□□□□ 0.6
CPT1AP50416 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.82■□□□□ 0.6
CPT1AP50416 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.82■□□□□ 0.6
CPT1AP50416 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.82■□□□□ 0.6
CPT1AP50416 ALG1L8P-201ENST00000533887 760 ntBASIC18.82■□□□□ 0.6
CPT1AP50416 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPT1AP50416 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.82■□□□□ 0.6
CPT1AP50416 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.82■□□□□ 0.6
CPT1AP50416 AC027307.2-201ENST00000591252 911 ntBASIC18.82■□□□□ 0.6
CPT1AP50416 MIR6080-201ENST00000617359 66 ntBASIC18.82■□□□□ 0.6
CPT1AP50416 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.82■□□□□ 0.6
CPT1AP50416 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPT1AP50416 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPT1AP50416 AC093525.9-201ENST00000624961 1746 ntBASIC18.82■□□□□ 0.6
CPT1AP50416 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPT1AP50416 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.82■□□□□ 0.6
CPT1AP50416 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPT1AP50416 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPT1AP50416 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPT1AP50416 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.81■□□□□ 0.6
CPT1AP50416 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPT1AP50416 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPT1AP50416 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.81■□□□□ 0.6
CPT1AP50416 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPT1AP50416 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CPT1AP50416 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CPT1AP50416 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPT1AP50416 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.81■□□□□ 0.6
CPT1AP50416 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPT1AP50416 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPT1AP50416 AC131009.4-201ENST00000624048 1740 ntBASIC18.81■□□□□ 0.6
CPT1AP50416 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPT1AP50416 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.81■□□□□ 0.6
CPT1AP50416 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPT1AP50416 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.81■□□□□ 0.6
CPT1AP50416 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.81■□□□□ 0.6
CPT1AP50416 TREML5P-201ENST00000421694 576 ntBASIC18.81■□□□□ 0.6
CPT1AP50416 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CPT1AP50416 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.81■□□□□ 0.6
CPT1AP50416 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.81■□□□□ 0.6
CPT1AP50416 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.81■□□□□ 0.6
CPT1AP50416 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CPT1AP50416 IGHV3-42-201ENST00000520410 361 ntBASIC18.81■□□□□ 0.6
CPT1AP50416 AP000842.3-202ENST00000569238 1080 ntBASIC18.81■□□□□ 0.6
CPT1AP50416 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.81■□□□□ 0.6
CPT1AP50416 AL158211.3-201ENST00000607385 239 ntBASIC18.81■□□□□ 0.6
CPT1AP50416 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CPT1AP50416 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPT1AP50416 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPT1AP50416 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.81■□□□□ 0.6
CPT1AP50416 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPT1AP50416 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPT1AP50416 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPT1AP50416 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPT1AP50416 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CPT1AP50416 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CPT1AP50416 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.8■□□□□ 0.6
CPT1AP50416 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.8■□□□□ 0.6
CPT1AP50416 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 MIR346-201ENST00000362234 95 ntBASIC18.8■□□□□ 0.6
CPT1AP50416 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms