Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.65■□□□□ 0.58
CASP4P49662 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.65■□□□□ 0.58
CASP4P49662 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.65■□□□□ 0.58
CASP4P49662 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASP4P49662 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASP4P49662 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASP4P49662 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASP4P49662 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASP4P49662 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CASP4P49662 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.65■□□□□ 0.58
CASP4P49662 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CASP4P49662 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CASP4P49662 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.64■□□□□ 0.58
CASP4P49662 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.64■□□□□ 0.58
CASP4P49662 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP4P49662 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP4P49662 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP4P49662 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CASP4P49662 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CASP4P49662 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP4P49662 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CASP4P49662 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP4P49662 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP4P49662 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.64■□□□□ 0.57
CASP4P49662 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CASP4P49662 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP4P49662 AC073621.1-201ENST00000392730 636 ntBASIC18.64■□□□□ 0.57
CASP4P49662 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CASP4P49662 KRT18P27-201ENST00000427733 1299 ntBASIC18.64■□□□□ 0.57
CASP4P49662 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.64■□□□□ 0.57
CASP4P49662 TPM4P1-201ENST00000436100 807 ntBASIC18.64■□□□□ 0.57
CASP4P49662 AF186996.4-201ENST00000467186 377 ntBASIC18.64■□□□□ 0.57
CASP4P49662 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.64■□□□□ 0.57
CASP4P49662 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CASP4P49662 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP4P49662 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP4P49662 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP4P49662 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CASP4P49662 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP4P49662 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CASP4P49662 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CASP4P49662 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CASP4P49662 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASP4P49662 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CASP4P49662 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP4P49662 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CASP4P49662 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CASP4P49662 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.63■□□□□ 0.57
CASP4P49662 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP4P49662 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.63■□□□□ 0.57
CASP4P49662 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.63■□□□□ 0.57
CASP4P49662 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP4P49662 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.63■□□□□ 0.57
CASP4P49662 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.63■□□□□ 0.57
CASP4P49662 SLC25A6P4-201ENST00000586535 553 ntBASIC18.63■□□□□ 0.57
CASP4P49662 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CASP4P49662 TERC-201ENST00000602385 541 ntBASIC18.63■□□□□ 0.57
CASP4P49662 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.63■□□□□ 0.57
CASP4P49662 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
CASP4P49662 FAM215A-202ENST00000632077 792 ntBASIC18.63■□□□□ 0.57
CASP4P49662 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CASP4P49662 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.63■□□□□ 0.57
CASP4P49662 AC092171.3-201ENST00000610122 2651 ntBASIC18.63■□□□□ 0.57
CASP4P49662 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CASP4P49662 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CASP4P49662 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CASP4P49662 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.63■□□□□ 0.57
CASP4P49662 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.62■□□□□ 0.57
CASP4P49662 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP4P49662 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP4P49662 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CASP4P49662 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.62■□□□□ 0.57
CASP4P49662 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.62■□□□□ 0.57
CASP4P49662 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CASP4P49662 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP4P49662 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP4P49662 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.62■□□□□ 0.57
CASP4P49662 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP4P49662 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP4P49662 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP4P49662 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP4P49662 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.62■□□□□ 0.57
CASP4P49662 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.62■□□□□ 0.57
CASP4P49662 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
CASP4P49662 RNA5SP419-201ENST00000515908 135 ntBASIC18.62■□□□□ 0.57
CASP4P49662 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CASP4P49662 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.62■□□□□ 0.57
CASP4P49662 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.62■□□□□ 0.57
CASP4P49662 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.62■□□□□ 0.57
CASP4P49662 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.62■□□□□ 0.57
CASP4P49662 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.62■□□□□ 0.57
CASP4P49662 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.62■□□□□ 0.57
CASP4P49662 MIR7706-201ENST00000613747 67 ntBASIC18.62■□□□□ 0.57
CASP4P49662 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.62■□□□□ 0.57
CASP4P49662 AP002414.3-201ENST00000589352 1468 ntBASIC18.62■□□□□ 0.57
CASP4P49662 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.62■□□□□ 0.57
CASP4P49662 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.62■□□□□ 0.57
CASP4P49662 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.62■□□□□ 0.57
CASP4P49662 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CASP4P49662 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms