Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
COL15A1P39059 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL15A1P39059 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.51■■□□□ 1.03
COL15A1P39059 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
COL15A1P39059 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL15A1P39059 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL15A1P39059 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL15A1P39059 RNU1-129P-201ENST00000384064 167 ntBASIC21.51■■□□□ 1.03
COL15A1P39059 HNRNPA1P40-201ENST00000426371 1278 ntBASIC21.51■■□□□ 1.03
COL15A1P39059 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.51■■□□□ 1.03
COL15A1P39059 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL15A1P39059 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC21.51■■□□□ 1.03
COL15A1P39059 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.51■■□□□ 1.03
COL15A1P39059 U1.21-201ENST00000580816 167 ntBASIC21.51■■□□□ 1.03
COL15A1P39059 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
COL15A1P39059 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.51■■□□□ 1.03
COL15A1P39059 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL15A1P39059 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL15A1P39059 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL15A1P39059 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.51■■□□□ 1.03
COL15A1P39059 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.51■■□□□ 1.03
COL15A1P39059 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL15A1P39059 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.51■■□□□ 1.03
COL15A1P39059 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.51■■□□□ 1.03
COL15A1P39059 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
COL15A1P39059 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL15A1P39059 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
COL15A1P39059 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.51■■□□□ 1.03
COL15A1P39059 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.5■■□□□ 1.03
COL15A1P39059 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL15A1P39059 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.5■■□□□ 1.03
COL15A1P39059 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL15A1P39059 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL15A1P39059 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL15A1P39059 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL15A1P39059 HCG4-201ENST00000418983 998 ntBASIC21.5■■□□□ 1.03
COL15A1P39059 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.5■■□□□ 1.03
COL15A1P39059 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.5■■□□□ 1.03
COL15A1P39059 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.5■■□□□ 1.03
COL15A1P39059 AC005225.4-201ENST00000557330 545 ntBASIC21.5■■□□□ 1.03
COL15A1P39059 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL15A1P39059 AC008761.3-201ENST00000624803 892 ntBASIC21.5■■□□□ 1.03
COL15A1P39059 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL15A1P39059 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
COL15A1P39059 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL15A1P39059 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.5■■□□□ 1.03
COL15A1P39059 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
COL15A1P39059 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.5■■□□□ 1.03
COL15A1P39059 SLC22A20-204ENST00000530038 1673 ntBASIC21.5■■□□□ 1.03
COL15A1P39059 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.5■■□□□ 1.03
COL15A1P39059 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL15A1P39059 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
COL15A1P39059 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL15A1P39059 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.5■■□□□ 1.03
COL15A1P39059 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL15A1P39059 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL15A1P39059 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL15A1P39059 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.5■■□□□ 1.03
COL15A1P39059 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
COL15A1P39059 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.49■■□□□ 1.03
COL15A1P39059 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL15A1P39059 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
COL15A1P39059 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.49■■□□□ 1.03
COL15A1P39059 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.49■■□□□ 1.03
COL15A1P39059 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.49■■□□□ 1.03
COL15A1P39059 AC069120.2-201ENST00000524091 540 ntBASIC21.49■■□□□ 1.03
COL15A1P39059 ALG1L8P-201ENST00000533887 760 ntBASIC21.49■■□□□ 1.03
COL15A1P39059 AP000842.3-202ENST00000569238 1080 ntBASIC21.49■■□□□ 1.03
COL15A1P39059 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC21.49■■□□□ 1.03
COL15A1P39059 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.49■■□□□ 1.03
COL15A1P39059 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
COL15A1P39059 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL15A1P39059 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL15A1P39059 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
COL15A1P39059 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL15A1P39059 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.49■■□□□ 1.03
COL15A1P39059 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL15A1P39059 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL15A1P39059 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL15A1P39059 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
COL15A1P39059 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL15A1P39059 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.48■■□□□ 1.03
COL15A1P39059 AC092580.3-201ENST00000430932 139 ntBASIC21.48■■□□□ 1.03
COL15A1P39059 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.48■■□□□ 1.03
COL15A1P39059 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.48■■□□□ 1.03
COL15A1P39059 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL15A1P39059 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.48■■□□□ 1.03
COL15A1P39059 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.48■■□□□ 1.03
COL15A1P39059 MIR3909-201ENST00000579518 119 ntBASIC21.48■■□□□ 1.03
COL15A1P39059 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC21.48■■□□□ 1.03
COL15A1P39059 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.48■■□□□ 1.03
COL15A1P39059 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL15A1P39059 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
COL15A1P39059 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL15A1P39059 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
COL15A1P39059 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL15A1P39059 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL15A1P39059 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
COL15A1P39059 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL15A1P39059 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms