Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RPA3P35244 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RPA3P35244 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.33■□□□□ 0.36
RPA3P35244 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPA3P35244 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPA3P35244 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPA3P35244 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPA3P35244 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPA3P35244 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPA3P35244 RN7SL606P-201ENST00000472779 293 ntBASIC17.33■□□□□ 0.36
RPA3P35244 VENTXP7-201ENST00000475503 772 ntBASIC17.33■□□□□ 0.36
RPA3P35244 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.33■□□□□ 0.36
RPA3P35244 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RPA3P35244 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPA3P35244 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.33■□□□□ 0.36
RPA3P35244 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.33■□□□□ 0.36
RPA3P35244 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RPA3P35244 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RPA3P35244 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPA3P35244 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RPA3P35244 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPA3P35244 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPA3P35244 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPA3P35244 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RPA3P35244 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RPA3P35244 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPA3P35244 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RPA3P35244 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RPA3P35244 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.32■□□□□ 0.36
RPA3P35244 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.32■□□□□ 0.36
RPA3P35244 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.32■□□□□ 0.36
RPA3P35244 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
RPA3P35244 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.32■□□□□ 0.36
RPA3P35244 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.32■□□□□ 0.36
RPA3P35244 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.32■□□□□ 0.36
RPA3P35244 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.32■□□□□ 0.36
RPA3P35244 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.32■□□□□ 0.36
RPA3P35244 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 AC096633.1-201ENST00000422446 749 ntBASIC17.32■□□□□ 0.36
RPA3P35244 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.32■□□□□ 0.36
RPA3P35244 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
RPA3P35244 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
RPA3P35244 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.32■□□□□ 0.36
RPA3P35244 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RPA3P35244 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.32■□□□□ 0.36
RPA3P35244 AC007950.2-201ENST00000615045 2347 ntBASIC17.32■□□□□ 0.36
RPA3P35244 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.32■□□□□ 0.36
RPA3P35244 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
RPA3P35244 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RPA3P35244 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RPA3P35244 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RPA3P35244 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPA3P35244 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPA3P35244 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RPA3P35244 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPA3P35244 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.31■□□□□ 0.36
RPA3P35244 AC092364.2-201ENST00000596710 2692 ntBASIC17.31■□□□□ 0.36
RPA3P35244 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RPA3P35244 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.31■□□□□ 0.36
RPA3P35244 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPA3P35244 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPA3P35244 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPA3P35244 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RPA3P35244 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPA3P35244 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPA3P35244 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPA3P35244 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.31■□□□□ 0.36
RPA3P35244 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.31■□□□□ 0.36
RPA3P35244 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.31■□□□□ 0.36
RPA3P35244 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.31■□□□□ 0.36
RPA3P35244 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.31■□□□□ 0.36
RPA3P35244 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPA3P35244 AC124947.2-201ENST00000547118 1133 ntBASIC17.31■□□□□ 0.36
RPA3P35244 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPA3P35244 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.31■□□□□ 0.36
RPA3P35244 AP002414.4-201ENST00000589764 1148 ntBASIC17.31■□□□□ 0.36
RPA3P35244 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPA3P35244 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPA3P35244 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RPA3P35244 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.31■□□□□ 0.36
RPA3P35244 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.31■□□□□ 0.36
RPA3P35244 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.31■□□□□ 0.36
RPA3P35244 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.31■□□□□ 0.36
RPA3P35244 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPA3P35244 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms