Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.65□□□□□ -0.38
CKS2P33552 KRT8P47-201ENST00000604727 1398 ntBASIC12.65□□□□□ -0.38
CKS2P33552 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CKS2P33552 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CKS2P33552 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CKS2P33552 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.65□□□□□ -0.39
CKS2P33552 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CKS2P33552 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CKS2P33552 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CKS2P33552 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.64□□□□□ -0.39
CKS2P33552 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.64□□□□□ -0.39
CKS2P33552 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CKS2P33552 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CKS2P33552 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CKS2P33552 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.64□□□□□ -0.39
CKS2P33552 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CKS2P33552 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.64□□□□□ -0.39
CKS2P33552 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 KRT18P65-201ENST00000439811 1286 ntBASIC12.64□□□□□ -0.39
CKS2P33552 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.64□□□□□ -0.39
CKS2P33552 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.64□□□□□ -0.39
CKS2P33552 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC12.64□□□□□ -0.39
CKS2P33552 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.64□□□□□ -0.39
CKS2P33552 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 AL109923.1-201ENST00000618799 583 ntBASIC12.64□□□□□ -0.39
CKS2P33552 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CKS2P33552 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CKS2P33552 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.64□□□□□ -0.39
CKS2P33552 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CKS2P33552 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.64□□□□□ -0.39
CKS2P33552 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
CKS2P33552 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
CKS2P33552 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.64□□□□□ -0.39
CKS2P33552 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CKS2P33552 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.64□□□□□ -0.39
CKS2P33552 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CKS2P33552 MYO15B-237ENST00000642007 4893 ntBASIC12.63□□□□□ -0.39
CKS2P33552 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CKS2P33552 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
CKS2P33552 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.63□□□□□ -0.39
CKS2P33552 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CKS2P33552 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CKS2P33552 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.63□□□□□ -0.39
CKS2P33552 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.63□□□□□ -0.39
CKS2P33552 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.63□□□□□ -0.39
CKS2P33552 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.63□□□□□ -0.39
CKS2P33552 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.63□□□□□ -0.39
CKS2P33552 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.63□□□□□ -0.39
CKS2P33552 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC12.63□□□□□ -0.39
CKS2P33552 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC12.63□□□□□ -0.39
CKS2P33552 AC124947.2-201ENST00000547118 1133 ntBASIC12.63□□□□□ -0.39
CKS2P33552 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.63□□□□□ -0.39
CKS2P33552 RN7SL471P-201ENST00000580476 299 ntBASIC12.63□□□□□ -0.39
CKS2P33552 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.63□□□□□ -0.39
CKS2P33552 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
CKS2P33552 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CKS2P33552 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.63□□□□□ -0.39
CKS2P33552 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CKS2P33552 AC005052.1-201ENST00000625181 2492 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms