Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MSR1P21757 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.14■□□□□ 0.01
MSR1P21757 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
MSR1P21757 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MSR1P21757 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.14■□□□□ 0.01
MSR1P21757 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
MSR1P21757 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MSR1P21757 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MSR1P21757 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 LINC00982-205ENST00000420957 435 ntBASIC15.14■□□□□ 0.01
MSR1P21757 PRYP5-201ENST00000451909 266 ntBASIC15.14■□□□□ 0.01
MSR1P21757 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.14■□□□□ 0.01
MSR1P21757 BX005266.1-201ENST00000473402 457 ntBASIC15.14■□□□□ 0.01
MSR1P21757 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.14■□□□□ 0.01
MSR1P21757 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.14■□□□□ 0.01
MSR1P21757 MTDHP3-201ENST00000594186 672 ntBASIC15.14■□□□□ 0.01
MSR1P21757 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.14■□□□□ 0.01
MSR1P21757 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MSR1P21757 AC009053.2-201ENST00000563701 2365 ntBASIC15.14■□□□□ 0.01
MSR1P21757 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.14■□□□□ 0.01
MSR1P21757 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.14■□□□□ 0.01
MSR1P21757 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MSR1P21757 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.14■□□□□ 0.01
MSR1P21757 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
MSR1P21757 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MSR1P21757 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.14■□□□□ 0.01
MSR1P21757 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MSR1P21757 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.13■□□□□ 0.01
MSR1P21757 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
MSR1P21757 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.13■□□□□ 0.01
MSR1P21757 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.13■□□□□ 0.01
MSR1P21757 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.13■□□□□ 0.01
MSR1P21757 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.13■□□□□ 0.01
MSR1P21757 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
MSR1P21757 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.13■□□□□ 0.01
MSR1P21757 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 NKAPP1-205ENST00000585790 367 ntBASIC15.13■□□□□ 0.01
MSR1P21757 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.13■□□□□ 0.01
MSR1P21757 AL355877.3-201ENST00000622820 899 ntBASIC15.13■□□□□ 0.01
MSR1P21757 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.13■□□□□ 0.01
MSR1P21757 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
MSR1P21757 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MSR1P21757 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.12■□□□□ 0.01
MSR1P21757 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.12■□□□□ 0.01
MSR1P21757 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MSR1P21757 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
MSR1P21757 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
MSR1P21757 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
MSR1P21757 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
MSR1P21757 NCF1C-201ENST00000438382 1427 ntBASIC15.12■□□□□ 0.01
MSR1P21757 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
MSR1P21757 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MSR1P21757 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms