Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CFTRP13569 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC28.83■■■□□ 2.21
CFTRP13569 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.2
CFTRP13569 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
CFTRP13569 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
CFTRP13569 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC28.82■■■□□ 2.2
CFTRP13569 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CFTRP13569 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC28.82■■■□□ 2.2
CFTRP13569 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CFTRP13569 AC245100.3-201ENST00000441281 285 ntBASIC28.82■■■□□ 2.2
CFTRP13569 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC28.82■■■□□ 2.2
CFTRP13569 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
CFTRP13569 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
CFTRP13569 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC28.82■■■□□ 2.2
CFTRP13569 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
CFTRP13569 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
CFTRP13569 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
CFTRP13569 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC28.82■■■□□ 2.2
CFTRP13569 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CFTRP13569 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CFTRP13569 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC28.81■■■□□ 2.2
CFTRP13569 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC28.81■■■□□ 2.2
CFTRP13569 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC28.81■■■□□ 2.2
CFTRP13569 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC28.81■■■□□ 2.2
CFTRP13569 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
CFTRP13569 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC28.81■■■□□ 2.2
CFTRP13569 AL512343.1-201ENST00000605837 169 ntBASIC28.81■■■□□ 2.2
CFTRP13569 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CFTRP13569 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
CFTRP13569 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CFTRP13569 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
CFTRP13569 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CFTRP13569 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CFTRP13569 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CFTRP13569 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC28.8■■■□□ 2.2
CFTRP13569 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CFTRP13569 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CFTRP13569 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CFTRP13569 RBM39-205ENST00000397370 612 ntTSL 2 BASIC28.8■■■□□ 2.2
CFTRP13569 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC28.8■■■□□ 2.2
CFTRP13569 ORC6-206ENST00000568364 888 ntTSL 5 BASIC28.8■■■□□ 2.2
CFTRP13569 MIR4525-201ENST00000580000 75 ntBASIC28.8■■■□□ 2.2
CFTRP13569 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC28.8■■■□□ 2.2
CFTRP13569 SIGLEC29P-201ENST00000599873 1114 ntBASIC28.8■■■□□ 2.2
CFTRP13569 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC28.8■■■□□ 2.2
CFTRP13569 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC28.8■■■□□ 2.2
CFTRP13569 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC28.8■■■□□ 2.2
CFTRP13569 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC28.8■■■□□ 2.2
CFTRP13569 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CFTRP13569 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CFTRP13569 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
CFTRP13569 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
CFTRP13569 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC28.8■■■□□ 2.2
CFTRP13569 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC28.8■■■□□ 2.2
CFTRP13569 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
CFTRP13569 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC28.79■■■□□ 2.2
CFTRP13569 CD81-207ENST00000481687 890 ntTSL 2 BASIC28.79■■■□□ 2.2
CFTRP13569 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC28.79■■■□□ 2.2
CFTRP13569 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC28.79■■■□□ 2.2
CFTRP13569 RAB35-202ENST00000534951 939 ntTSL 2 BASIC28.79■■■□□ 2.2
CFTRP13569 AC044860.1-202ENST00000559481 777 ntBASIC28.79■■■□□ 2.2
CFTRP13569 SNX12-206ENST00000622259 661 ntTSL 5 BASIC28.79■■■□□ 2.2
CFTRP13569 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC28.79■■■□□ 2.2
CFTRP13569 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
CFTRP13569 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
CFTRP13569 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CFTRP13569 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC28.79■■■□□ 2.2
CFTRP13569 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
CFTRP13569 AC133963.1-201ENST00000504166 1679 ntBASIC28.79■■■□□ 2.2
CFTRP13569 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CFTRP13569 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC28.79■■■□□ 2.2
CFTRP13569 FRMD8P1-201ENST00000440433 1524 ntBASIC28.79■■■□□ 2.2
CFTRP13569 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC28.78■■■□□ 2.2
CFTRP13569 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CFTRP13569 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC28.78■■■□□ 2.2
CFTRP13569 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC28.78■■■□□ 2.2
CFTRP13569 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC28.78■■■□□ 2.2
CFTRP13569 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC28.78■■■□□ 2.2
CFTRP13569 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC28.78■■■□□ 2.2
CFTRP13569 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CFTRP13569 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
CFTRP13569 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC28.78■■■□□ 2.2
CFTRP13569 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC28.78■■■□□ 2.2
CFTRP13569 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CFTRP13569 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
CFTRP13569 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC28.78■■■□□ 2.2
CFTRP13569 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC28.78■■■□□ 2.2
CFTRP13569 ELK1P1-201ENST00000485699 580 ntBASIC28.78■■■□□ 2.2
CFTRP13569 TEX48-202ENST00000612244 662 ntTSL 3 BASIC28.78■■■□□ 2.2
CFTRP13569 5S_rRNA.22-201ENST00000614916 106 ntBASIC28.78■■■□□ 2.2
CFTRP13569 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
CFTRP13569 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC28.77■■■□□ 2.2
CFTRP13569 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
CFTRP13569 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC28.77■■■□□ 2.2
CFTRP13569 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC28.77■■■□□ 2.2
CFTRP13569 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CFTRP13569 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC28.77■■■□□ 2.2
CFTRP13569 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC28.77■■■□□ 2.2
CFTRP13569 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CFTRP13569 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC28.77■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms