Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCG2P13521 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.65■□□□□ 0.74
SCG2P13521 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCG2P13521 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.65■□□□□ 0.74
SCG2P13521 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCG2P13521 MIR574-201ENST00000385209 96 ntBASIC19.65■□□□□ 0.74
SCG2P13521 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.65■□□□□ 0.74
SCG2P13521 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.65■□□□□ 0.74
SCG2P13521 AC145285.3-201ENST00000564603 959 ntBASIC19.65■□□□□ 0.74
SCG2P13521 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.65■□□□□ 0.74
SCG2P13521 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.65■□□□□ 0.74
SCG2P13521 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.65■□□□□ 0.74
SCG2P13521 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCG2P13521 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCG2P13521 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.65■□□□□ 0.74
SCG2P13521 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.65■□□□□ 0.74
SCG2P13521 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.65■□□□□ 0.74
SCG2P13521 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCG2P13521 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCG2P13521 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.65■□□□□ 0.74
SCG2P13521 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.65■□□□□ 0.74
SCG2P13521 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCG2P13521 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SCG2P13521 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCG2P13521 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SCG2P13521 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCG2P13521 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCG2P13521 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCG2P13521 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SCG2P13521 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCG2P13521 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCG2P13521 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
SCG2P13521 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.64■□□□□ 0.74
SCG2P13521 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
SCG2P13521 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SCG2P13521 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCG2P13521 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.64■□□□□ 0.73
SCG2P13521 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCG2P13521 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
SCG2P13521 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCG2P13521 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.64■□□□□ 0.73
SCG2P13521 MRPL20P1-201ENST00000400819 433 ntBASIC19.64■□□□□ 0.73
SCG2P13521 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.64■□□□□ 0.73
SCG2P13521 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.64■□□□□ 0.73
SCG2P13521 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCG2P13521 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.64■□□□□ 0.73
SCG2P13521 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.64■□□□□ 0.73
SCG2P13521 OR7E47P-204ENST00000575924 449 ntBASIC19.64■□□□□ 0.73
SCG2P13521 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCG2P13521 Z83851.2-201ENST00000609564 659 ntBASIC19.64■□□□□ 0.73
SCG2P13521 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCG2P13521 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SCG2P13521 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCG2P13521 AL121761.2-201ENST00000598007 1648 ntBASIC19.64■□□□□ 0.73
SCG2P13521 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCG2P13521 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCG2P13521 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCG2P13521 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCG2P13521 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SCG2P13521 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SCG2P13521 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCG2P13521 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCG2P13521 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCG2P13521 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
SCG2P13521 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
SCG2P13521 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SCG2P13521 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.63■□□□□ 0.73
SCG2P13521 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.63■□□□□ 0.73
SCG2P13521 AC104109.2-201ENST00000602919 1418 ntBASIC19.63■□□□□ 0.73
SCG2P13521 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SCG2P13521 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.63■□□□□ 0.73
SCG2P13521 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.63■□□□□ 0.73
SCG2P13521 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.63■□□□□ 0.73
SCG2P13521 RPL13AP23-201ENST00000480739 586 ntBASIC19.63■□□□□ 0.73
SCG2P13521 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SCG2P13521 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.63■□□□□ 0.73
SCG2P13521 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SCG2P13521 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.63■□□□□ 0.73
SCG2P13521 REXO1L3P-201ENST00000622202 1288 ntBASIC19.63■□□□□ 0.73
SCG2P13521 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.63■□□□□ 0.73
SCG2P13521 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.63■□□□□ 0.73
SCG2P13521 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCG2P13521 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms