Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RFPL1O75677 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
RFPL1O75677 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.18■□□□□ 0.34
RFPL1O75677 AL662844.4-201ENST00000606367 2838 ntBASIC17.18■□□□□ 0.34
RFPL1O75677 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.18■□□□□ 0.34
RFPL1O75677 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RFPL1O75677 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.18■□□□□ 0.34
RFPL1O75677 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RFPL1O75677 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.18■□□□□ 0.34
RFPL1O75677 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.18■□□□□ 0.34
RFPL1O75677 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.18■□□□□ 0.34
RFPL1O75677 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.18■□□□□ 0.34
RFPL1O75677 GUSBP12-201ENST00000513727 720 ntBASIC17.18■□□□□ 0.34
RFPL1O75677 AL662844.1-201ENST00000546340 181 ntBASIC17.18■□□□□ 0.34
RFPL1O75677 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.18■□□□□ 0.34
RFPL1O75677 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.18■□□□□ 0.34
RFPL1O75677 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.18■□□□□ 0.34
RFPL1O75677 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 Z69720.1-201ENST00000601483 472 ntBASIC17.18■□□□□ 0.34
RFPL1O75677 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RFPL1O75677 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.18■□□□□ 0.34
RFPL1O75677 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RFPL1O75677 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 PCDHB17P-201ENST00000539533 2393 ntBASIC17.18■□□□□ 0.34
RFPL1O75677 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.18■□□□□ 0.34
RFPL1O75677 AC079328.2-201ENST00000561241 3354 ntBASIC17.18■□□□□ 0.34
RFPL1O75677 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFPL1O75677 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.17■□□□□ 0.34
RFPL1O75677 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFPL1O75677 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFPL1O75677 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFPL1O75677 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.17■□□□□ 0.34
RFPL1O75677 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.17■□□□□ 0.34
RFPL1O75677 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFPL1O75677 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.17■□□□□ 0.34
RFPL1O75677 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.17■□□□□ 0.34
RFPL1O75677 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.17■□□□□ 0.34
RFPL1O75677 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.17■□□□□ 0.34
RFPL1O75677 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFPL1O75677 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RFPL1O75677 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFPL1O75677 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
RFPL1O75677 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFPL1O75677 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFPL1O75677 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFPL1O75677 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFPL1O75677 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.17■□□□□ 0.34
RFPL1O75677 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.17■□□□□ 0.34
RFPL1O75677 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.17■□□□□ 0.34
RFPL1O75677 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.17■□□□□ 0.34
RFPL1O75677 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RFPL1O75677 GPALPP1-207ENST00000611650 899 ntBASIC17.17■□□□□ 0.34
RFPL1O75677 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.17■□□□□ 0.34
RFPL1O75677 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RFPL1O75677 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.17■□□□□ 0.34
RFPL1O75677 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFPL1O75677 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFPL1O75677 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RFPL1O75677 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFPL1O75677 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFPL1O75677 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RFPL1O75677 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.16■□□□□ 0.34
RFPL1O75677 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 CYP2T1P-202ENST00000641596 2535 ntBASIC17.16■□□□□ 0.34
RFPL1O75677 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
RFPL1O75677 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.16■□□□□ 0.34
RFPL1O75677 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 AC009336.1-201ENST00000608941 1553 ntBASIC17.16■□□□□ 0.34
RFPL1O75677 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RFPL1O75677 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RFPL1O75677 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
RFPL1O75677 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RFPL1O75677 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.16■□□□□ 0.34
RFPL1O75677 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms