Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.79■□□□□ 0.12
IDH3BO43837 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.79■□□□□ 0.12
IDH3BO43837 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
IDH3BO43837 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.79■□□□□ 0.12
IDH3BO43837 AC116353.5-201ENST00000638148 1699 ntBASIC15.79■□□□□ 0.12
IDH3BO43837 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
IDH3BO43837 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IDH3BO43837 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
IDH3BO43837 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.78■□□□□ 0.12
IDH3BO43837 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
IDH3BO43837 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.78■□□□□ 0.12
IDH3BO43837 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
IDH3BO43837 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.78■□□□□ 0.12
IDH3BO43837 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.78■□□□□ 0.12
IDH3BO43837 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.78■□□□□ 0.12
IDH3BO43837 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 AC117947.1-201ENST00000427448 529 ntBASIC15.78■□□□□ 0.12
IDH3BO43837 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.78■□□□□ 0.12
IDH3BO43837 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.78■□□□□ 0.12
IDH3BO43837 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.78■□□□□ 0.12
IDH3BO43837 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.78■□□□□ 0.12
IDH3BO43837 AC005332.3-201ENST00000589904 676 ntBASIC15.78■□□□□ 0.12
IDH3BO43837 AL390719.2-201ENST00000606993 987 ntBASIC15.78■□□□□ 0.12
IDH3BO43837 AC133561.5-201ENST00000635547 218 ntBASIC15.78■□□□□ 0.12
IDH3BO43837 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
IDH3BO43837 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.78■□□□□ 0.12
IDH3BO43837 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
IDH3BO43837 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.78■□□□□ 0.12
IDH3BO43837 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
IDH3BO43837 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.78■□□□□ 0.12
IDH3BO43837 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IDH3BO43837 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
IDH3BO43837 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
IDH3BO43837 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
IDH3BO43837 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.77■□□□□ 0.12
IDH3BO43837 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
IDH3BO43837 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
IDH3BO43837 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
IDH3BO43837 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.77■□□□□ 0.12
IDH3BO43837 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
IDH3BO43837 AC073912.3-201ENST00000624414 853 ntBASIC15.77■□□□□ 0.12
IDH3BO43837 AC066615.1-201ENST00000640911 628 ntBASIC15.77■□□□□ 0.12
IDH3BO43837 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IDH3BO43837 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
IDH3BO43837 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
IDH3BO43837 AC132872.4-202ENST00000622924 2756 ntBASIC15.77■□□□□ 0.11
IDH3BO43837 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
IDH3BO43837 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
IDH3BO43837 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.77■□□□□ 0.11
IDH3BO43837 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.77■□□□□ 0.11
IDH3BO43837 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
IDH3BO43837 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms