Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CDC7O00311 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.8■□□□□ 0.28
CDC7O00311 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC7O00311 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDC7O00311 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC7O00311 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CDC7O00311 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDC7O00311 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.8■□□□□ 0.28
CDC7O00311 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.8■□□□□ 0.28
CDC7O00311 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDC7O00311 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.8■□□□□ 0.28
CDC7O00311 AC064862.7-201ENST00000604520 867 ntBASIC16.8■□□□□ 0.28
CDC7O00311 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.8■□□□□ 0.28
CDC7O00311 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDC7O00311 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.8■□□□□ 0.28
CDC7O00311 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CDC7O00311 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.8■□□□□ 0.28
CDC7O00311 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.8■□□□□ 0.28
CDC7O00311 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.8■□□□□ 0.28
CDC7O00311 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CDC7O00311 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC7O00311 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDC7O00311 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC7O00311 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CDC7O00311 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDC7O00311 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDC7O00311 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.79■□□□□ 0.28
CDC7O00311 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.79■□□□□ 0.28
CDC7O00311 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.79■□□□□ 0.28
CDC7O00311 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.79■□□□□ 0.28
CDC7O00311 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.79■□□□□ 0.28
CDC7O00311 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 TSPY19P-201ENST00000418461 509 ntBASIC16.79■□□□□ 0.28
CDC7O00311 TSPY18P-201ENST00000441642 509 ntBASIC16.79■□□□□ 0.28
CDC7O00311 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.79■□□□□ 0.28
CDC7O00311 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.79■□□□□ 0.28
CDC7O00311 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.79■□□□□ 0.28
CDC7O00311 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.79■□□□□ 0.28
CDC7O00311 MTDHP3-201ENST00000594186 672 ntBASIC16.79■□□□□ 0.28
CDC7O00311 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CDC7O00311 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CDC7O00311 AC079328.2-201ENST00000561241 3354 ntBASIC16.79■□□□□ 0.28
CDC7O00311 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 OR6D1P-203ENST00000641209 4860 ntBASIC16.79■□□□□ 0.28
CDC7O00311 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.79■□□□□ 0.28
CDC7O00311 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CDC7O00311 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.79■□□□□ 0.28
CDC7O00311 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.79■□□□□ 0.28
CDC7O00311 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.79■□□□□ 0.28
CDC7O00311 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDC7O00311 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC7O00311 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.78■□□□□ 0.28
CDC7O00311 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.78■□□□□ 0.28
CDC7O00311 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CDC7O00311 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC7O00311 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC7O00311 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC7O00311 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.78■□□□□ 0.28
CDC7O00311 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.78■□□□□ 0.28
CDC7O00311 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.78■□□□□ 0.28
CDC7O00311 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDC7O00311 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CDC7O00311 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.78■□□□□ 0.28
CDC7O00311 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CDC7O00311 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC7O00311 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.78■□□□□ 0.28
CDC7O00311 RBM17P3-201ENST00000417687 1192 ntBASIC16.78■□□□□ 0.28
CDC7O00311 PRYP5-201ENST00000451909 266 ntBASIC16.78■□□□□ 0.28
CDC7O00311 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC7O00311 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC7O00311 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.78■□□□□ 0.28
CDC7O00311 AL121772.3-201ENST00000610840 674 ntBASIC16.78■□□□□ 0.28
CDC7O00311 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDC7O00311 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDC7O00311 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC7O00311 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDC7O00311 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms