Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3FA6NER0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 AC107918.2-201ENST00000530817 355 ntBASIC17■□□□□ 0.31
TBC1D3FA6NER0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3FA6NER0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17■□□□□ 0.31
TBC1D3FA6NER0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3FA6NER0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3FA6NER0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3FA6NER0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17■□□□□ 0.31
TBC1D3FA6NER0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 AC004835.2-201ENST00000603762 682 ntBASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 AC018470.1-201ENST00000624790 3129 ntBASIC16.99■□□□□ 0.31
TBC1D3FA6NER0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 HMGN1P19-201ENST00000436976 333 ntBASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 MIR4515-201ENST00000584082 81 ntBASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 AC105339.1-204ENST00000636249 355 ntBASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 AC134043.2-201ENST00000624206 2238 ntBASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.98■□□□□ 0.31
TBC1D3FA6NER0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms