Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 AC025678.2-201ENST00000562061 970 ntBASIC14.94□□□□□ -0.02
MBD3L3A6NE82 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 LINC02012-201ENST00000608206 1725 ntBASIC14.94□□□□□ -0.02
MBD3L3A6NE82 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
MBD3L3A6NE82 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 AC005237.2-201ENST00000434368 219 ntBASIC14.93□□□□□ -0.02
MBD3L3A6NE82 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 LINC00628-201ENST00000628516 1289 ntBASIC14.93□□□□□ -0.02
MBD3L3A6NE82 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.93□□□□□ -0.02
MBD3L3A6NE82 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 WASH6P-202ENST00000359512 1437 ntBASIC14.92□□□□□ -0.02
MBD3L3A6NE82 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 AC109322.1-201ENST00000524499 1264 ntBASIC14.92□□□□□ -0.02
MBD3L3A6NE82 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 KRT8P23-201ENST00000560090 1207 ntBASIC14.92□□□□□ -0.02
MBD3L3A6NE82 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 AC106028.4-201ENST00000614509 607 ntBASIC14.92□□□□□ -0.02
MBD3L3A6NE82 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MBD3L3A6NE82 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms