Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM27A0A1W2PRY6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM27A0A1W2PRY6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM27A0A1W2PRY6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 AC063926.3-201ENST00000624734 5658 ntBASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 AC069152.1-201ENST00000438030 544 ntBASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 AL162430.1-201ENST00000480705 870 ntBASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 AC097488.1-201ENST00000507834 756 ntBASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 AC112698.1-201ENST00000510299 916 ntBASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 TUBB8P12-201ENST00000308911 1335 ntBASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 TUBB7P-202ENST00000428444 1305 ntBASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 TUBB8P7-204ENST00000567960 1332 ntBASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM27A0A1W2PRY6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 PVRIG2P-201ENST00000435460 978 ntBASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 HLA-J-202ENST00000469281 1241 ntBASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 SEC1P-202ENST00000473944 940 ntBASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC12.79□□□□□ -0.36
SMIM27A0A1W2PRY6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms