Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 AC104109.2-201ENST00000602919 1418 ntBASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 AC080080.1-201ENST00000625121 2420 ntBASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGC4Q9Y5F7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 FRMD8P1-201ENST00000440433 1524 ntBASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 AC009947.1-201ENST00000444350 727 ntBASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 PAWRP1-201ENST00000451083 565 ntBASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 AC108073.2-201ENST00000464002 357 ntBASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 AC108751.1-201ENST00000490852 363 ntBASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 AC004790.2-201ENST00000623588 572 ntBASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGC4Q9Y5F7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
PCDHGC4Q9Y5F7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGC4Q9Y5F7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.27■□□□□ 0.35
PCDHGC4Q9Y5F7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PCDHGC4Q9Y5F7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGC4Q9Y5F7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGC4Q9Y5F7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDHGC4Q9Y5F7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
PCDHGC4Q9Y5F7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGC4Q9Y5F7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGC4Q9Y5F7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGC4Q9Y5F7 LTB4R2-202ENST00000528054 3092 ntBASIC17.27■□□□□ 0.35
PCDHGC4Q9Y5F7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.27■□□□□ 0.35
PCDHGC4Q9Y5F7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGC4Q9Y5F7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 AC060834.1-201ENST00000443027 2032 ntBASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 AC092068.3-201ENST00000587894 2016 ntBASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 Z83851.2-201ENST00000609564 659 ntBASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 GGTLC5P-201ENST00000617623 998 ntBASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 AF228730.7-201ENST00000641842 219 ntBASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PCDHGC4Q9Y5F7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms