Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 AC079781.4-201ENST00000641908 219 ntBASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 AC020916.1-201ENST00000587762 1774 ntBASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 KRT19P2-202ENST00000557173 1012 ntBASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 PDPK2P-202ENST00000562415 1191 ntBASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 C20orf181-201ENST00000623918 480 ntBASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHB2Q9Y5E7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 PAWRP1-201ENST00000451083 565 ntBASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 CXCL1P1-201ENST00000502804 216 ntBASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 YBX1P5-201ENST00000509441 847 ntBASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 AC025580.3-201ENST00000617932 1424 ntBASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHB2Q9Y5E7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 DNAJB3-202ENST00000449667 1266 ntBASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 MIR4469-201ENST00000583919 79 ntBASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 AL078644.1-201ENST00000609881 752 ntBASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDHB2Q9Y5E7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB2Q9Y5E7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms