Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.1■□□□□ 0.17
IFT52Q9Y366 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.1■□□□□ 0.17
IFT52Q9Y366 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.1■□□□□ 0.17
IFT52Q9Y366 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.1■□□□□ 0.17
IFT52Q9Y366 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
IFT52Q9Y366 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
IFT52Q9Y366 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
IFT52Q9Y366 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.1■□□□□ 0.17
IFT52Q9Y366 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 AC005332.1-201ENST00000577698 1310 ntBASIC16.1■□□□□ 0.17
IFT52Q9Y366 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.1■□□□□ 0.17
IFT52Q9Y366 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.1■□□□□ 0.17
IFT52Q9Y366 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.1■□□□□ 0.17
IFT52Q9Y366 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
IFT52Q9Y366 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
IFT52Q9Y366 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IFT52Q9Y366 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 AC008741.2-201ENST00000612792 3115 ntBASIC16.09■□□□□ 0.17
IFT52Q9Y366 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 STK25P1-201ENST00000585406 838 ntBASIC16.09■□□□□ 0.17
IFT52Q9Y366 NTF6B-201ENST00000591913 560 ntBASIC16.09■□□□□ 0.17
IFT52Q9Y366 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 KRT8P10-201ENST00000450021 1447 ntBASIC16.09■□□□□ 0.17
IFT52Q9Y366 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.09■□□□□ 0.17
IFT52Q9Y366 AL353593.2-201ENST00000602529 1483 ntBASIC16.09■□□□□ 0.17
IFT52Q9Y366 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IFT52Q9Y366 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
IFT52Q9Y366 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
IFT52Q9Y366 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
IFT52Q9Y366 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IFT52Q9Y366 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IFT52Q9Y366 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
IFT52Q9Y366 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms