Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.34■□□□□ 0.21
LRCH1Q9Y2L9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.21
LRCH1Q9Y2L9 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRCH1Q9Y2L9 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.33■□□□□ 0.21
LRCH1Q9Y2L9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRCH1Q9Y2L9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRCH1Q9Y2L9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
LRCH1Q9Y2L9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.33■□□□□ 0.21
LRCH1Q9Y2L9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 SLC25A1P3-201ENST00000395415 828 ntBASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 AC073195.1-201ENST00000607241 877 ntBASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 AC113410.3-201ENST00000623366 203 ntBASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH1Q9Y2L9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 HLA-A-202ENST00000376806 1854 ntBASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 AC013268.4-201ENST00000637413 2228 ntBASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms